Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0624 ATGGAAGGAAAGGAAGTTGCTCTACTGGGATATGGATCAATGGTTCTAAACTGCCTAAAAGCAAGCTCACTTCTTTCAGAGCTAGGGATCGAGGTCACAGTTGTTGATGCAAGGTTCTGCAAGCCCCTGGACATCAACCTTCTCAGGCAGCTTTGTGAAAATCATTCCTTCCTGATTACTGTTGAGGAGGGATCTATTGGGGGATTTGGTTCTCATGTTGCTCAGTTTTTTGCTCTTGATGGACAGCTTGATGTAAGAGTTAAGTGGCGACCTATTGTGTTACCGGACAATTACATAGAGCATGCATCCCCAAATGAGCAGCTTGATGAGGCGGGGCTTACTGGACACCACATTGCTGCCACAGCTTTGAGTTTGCTGGGCCGTACCCGTGAAGCCCTTCATTTCATGTATTCATAG 417 0.4652 MEGKEVALLGYGSMVLNCLKASSLLSELGIEVTVVDARFCKPLDINLLRQLCENHSFLITVEEGSIGGFGSHVAQFFALDGQLDVRVKWRPIVLPDNYIEHASPNEQLDEAGLTGHHIAATALSLLGRTREALHFMYS 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0624 138 PANTHER 1-D-DEOXYXYLULOSE 5-PHOSPHATE SYNTHASE-RELATED 2 133 IPR005477 GO:0008661|GO:0016114
Lele04g0624 138 SUPERFAMILY TK C-terminal domain-like 2 126 IPR009014 GO:0003824
Lele04g0624 138 FunFam 1-deoxy-D-xylulose-5-phosphate synthase 1 127 - -
Lele04g0624 138 Gene3D - 1 126 IPR009014 GO:0003824
Lele04g0624 138 Pfam Transketolase, C-terminal domain 2 118 IPR033248 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0624 Lele-ChrLele04 3779057 3779935 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0624 04 3779057 3779935 Lele04g0624 04 3779057 3779935 ECH
Lele01g0617 01 3628250 3633772 Lele04g0624 04 3779057 3779935 hybridization
Lele02g0607 02 3635532 3640775 Lele04g0624 04 3779057 3779935 hybridization