Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0571 ATGGCCGTGAGAAGGTTATGCCCTGGAAATTCTTCGTGCAGCAATAGCCTTGTATATGTTGATCCAAATCTACCACTACCTAGAACTTCAGCTAAGACCCTGAGTAGCTGTAATGAACAAGAAGTGTCTGATCCTAACTATAGCCATATATGGAAAATGGAAAGGGAAATCTTTCTGTGGGAACGTAAACGGGATTTGGATAAGAGAAGTAAATTGAGAGGGGCTTTAAAGATAAAGAATCGAATGGGCCTCGCACGGACCCAAAATGAAATTCAAAGGCATGAAATTACATTACGTGGCTTGGATGGGCTCCACAAAAGAAAAGGTATTTGTTGGATGAATGCCACTACCACTCTCAATGTCAAATCTCAACCATTATTTTCAGAGCCCCACGCTGTTGTCAGCCATTACGGGAATACAGAAAACAGAAATCAATCCGCCATGGTTTTCTGGGTTTTTGGCTATGGTTCACTGGTGTGGAACCCAGGATTTGATTACGATGAGAAAATGGTTGGATTCATAAAGGACTATAGACGTGTCTTTGATTTAGCATGTATTGATCACAGGGGTACGCCTGAAAACCCTGCAAGAACTTGCACATTGGAGCCAAAAGAAGGGGCAGTTTGCTGGGGCGCTGCGTATTGTGTTCTTGGAGGCCCTGAAAAGGAGAAACTGGCTATGCAGTATTTGGAGCGGAGGGAATGCGAATATGATCAAAAGACCCTTGTAGACTTTTACAAGGAAGGAGATTCAGTGAACCCCGCGTTAACTGGAATTATAGTATTCACATCTACCGCAGACAAAGCAAACAAATATTACCTGGGACCTGCTCCTCTGGAAGACATGGCTAGGCAAATAGCAATAGCCTTTGGTCCTTGTGGGAACAACAGAGATTATCTCTTCCGTTTAGAAAAGGCCATGTATGATATCGGCCACGAGGACGACATAGTGATAGAGCTTGCTAATGAAGTGAGGAAGGTACTTGGGTTTGTGGGGAATGTGACGCCAAAGGAGACCTCTGCAGTTGGAGCAGCTCAACTTGCACAATCTTCTCACGTACCAATCCCGGCTCTCCAATTACACCCACTTCCAGAACCAATTGCGTAG 1107 0.4444 MAVRRLCPGNSSCSNSLVYVDPNLPLPRTSAKTLSSCNEQEVSDPNYSHIWKMEREIFLWERKRDLDKRSKLRGALKIKNRMGLARTQNEIQRHEITLRGLDGLHKRKGICWMNATTTLNVKSQPLFSEPHAVVSHYGNTENRNQSAMVFWVFGYGSLVWNPGFDYDEKMVGFIKDYRRVFDLACIDHRGTPENPARTCTLEPKEGAVCWGAAYCVLGGPEKEKLAMQYLERRECEYDQKTLVDFYKEGDSVNPALTGIIVFTSTADKANKYYLGPAPLEDMARQIAIAFGPCGNNRDYLFRLEKAMYDIGHEDDIVIELANEVRKVLGFVGNVTPKETSAVGAAQLAQSSHVPIPALQLHPLPEPIA 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0571 368 PANTHER CATION TRANSPORT PROTEIN CHAC-RELATED 148 336 IPR006840 GO:0003839|GO:0006751
Lele04g0571 368 Pfam ChaC-like protein 151 326 IPR006840 GO:0003839|GO:0006751
Lele04g0571 368 CDD GGCT_like 152 257 IPR013024 -
Lele04g0571 368 Gene3D - 136 319 - -
Lele04g0571 368 FunFam Gamma-glutamylcyclotransferase 149 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0571 Lele-ChrLele04 3467271 3472733 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0571 04 3467271 3472733 Lele04g0571 04 3467271 3472733 ECH
Lele01g0561 01 3324554 3326556 Lele04g0571 04 3467271 3472733 hybridization
Lele02g0554 02 3333509 3338360 Lele04g0571 04 3467271 3472733 hybridization