Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0434 ATGTGTGCTAACAAGACAAAGCAGAAAGAAAAGAAAATGGGTGAGTTGAGTGTGTCTGTTGATAATGTAGTGAATTTGGTGATATATAGAAGCATATGCTTCTCACAAGCATCCAGAACATGCTCCGTATCTCCTGCGAAACCCGGTCATGTTTCCTCCCCGGACAGATCAAAGTTCCGTAGGCACTCCGTTGCCACCAGCGTTGGTACCAAAGCGATGGGAGAGAAAAGCGCTACTGTTTCAAGCATTGTTGTCTATGTTACTGTACCCAACAAAGAAGCAGGCAAGAAGTTGGTCGAAAGCGTTGTGGAAGAGAGACTTGCAGCTTGTGTAAATAGGGTTCCAGGTGTTGAATCAGTGTATGAATGGAAAGGAGAGATCCAAACTGATTCGGAGGAACTTCTTATAATCAAGACTAGGCAATCTCTTTTGGAAGCACTGACGGAGCATGTCAAAGCAAATCACGAATATGAGTAA 477 0.4382 MCANKTKQKEKKMGELSVSVDNVVNLVIYRSICFSQASRTCSVSPAKPGHVSSPDRSKFRRHSVATSVGTKAMGEKSATVSSIVVYVTVPNKEAGKKLVESVVEERLAACVNRVPGVESVYEWKGEIQTDSEELLIIKTRQSLLEALTEHVKANHEYE 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0434 158 Gene3D - 61 158 IPR015867 -
Lele04g0434 158 Pfam CutA1 divalent ion tolerance protein 83 158 IPR004323 GO:0010038
Lele04g0434 158 SUPERFAMILY GlnB-like 82 158 IPR011322 -
Lele04g0434 158 PANTHER DIVALENT CATION TOLERANCE CUTA-RELATED 56 158 IPR004323 GO:0010038
Lele04g0434 158 MobiDBLite consensus disorder prediction 43 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0434 Lele-ChrLele04 2563142 2567013 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0434 04 2563142 2567013 Lele04g0434 04 2563142 2567013 ECH
Lele01g0429 01 2516224 2517849 Lele04g0434 04 2563142 2567013 hybridization
Lele02g0426 02 2462994 2464647 Lele04g0434 04 2563142 2567013 hybridization