Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0426 ATGGCTTCCACTCTCGCTACTTCCACCAAAGCTTCCTTCGTCTTCGCATCTTCGCTGCATCGCCATCTTCCCCTCGTTGGCGCTTTCTGCATCTTCAGCTCGGGCTTCTGTTCCCCACTGTATTCCTCCTCCTCCAAAACGGGCTGTGCTCAATCTCTCCCCATTTTCCCTCTCTTACAATCAAAGTTCCGTAGGCACTCCGCTGCCACCAGCGTTGGTACCAAAGCGATGGGAGAGAAAAGCGCCACTGTTCCAAGCATTGTTGTCTATGTTACTGTTCCCAACAAAGAAGCAGGCAAGAAGTTGGCCGAAATCATTGTGAAAGAGAGACTTGCAGCTTGTGTAAATAGGATTCCAGGTGTTGAATCAGTGTATGAATGGAAAGGAGAGATCCAAACTGATTTGGAGGAACTTCTTATAATCAAGACTAGGCAATCTCTTTTGGAAGCACTGACGGAGCATGTCAAAGCAAATCACGAATATGAGGTGCCAGAAGTGATCTCTTTACCCATCACGGGGGGCAATCTTAAATACCTAGAATGGATTAAAGACAGCACCAGAGAGTGA 567 0.4744 MASTLATSTKASFVFASSLHRHLPLVGAFCIFSSGFCSPLYSSSSKTGCAQSLPIFPLLQSKFRRHSAATSVGTKAMGEKSATVPSIVVYVTVPNKEAGKKLAEIIVKERLAACVNRIPGVESVYEWKGEIQTDLEELLIIKTRQSLLEALTEHVKANHEYEVPEVISLPITGGNLKYLEWIKDSTRE 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0426 188 FunFam Protein CutA 1, chloroplastic 77 188 - -
Lele02g0426 188 Gene3D - 65 187 IPR015867 -
Lele02g0426 188 PANTHER DIVALENT CATION TOLERANCE CUTA-RELATED 57 188 IPR004323 GO:0010038
Lele02g0426 188 Pfam CutA1 divalent ion tolerance protein 87 184 IPR004323 GO:0010038
Lele02g0426 188 SUPERFAMILY GlnB-like 86 187 IPR011322 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0426 Lele-ChrLele02 2462994 2464647 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0426 02 2462994 2464647 Lele02g0426 02 2462994 2464647 ECH
Lele02g0426 02 2462994 2464647 Lele03g0444 03 2522586 2524296 hybridization
Lele02g0426 02 2462994 2464647 Lele04g0434 04 2563142 2567013 hybridization