Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0182 ATGGGTGAGTGGCAGTCCCTTATCCAATCCATTCTTCTTGGTCTCATTTTCTCTTACCTTCTTGCCAAGCTCATATCCATCGTCGTATCATTCAAGGACGATAATCTGACTATAACTCGCCGCAGTATTAGTAGCACCAACCATATAAGTAATCGGAGCAAGATAGAACCCGATGTCAGCCCGTTTGCTCGCAGGCCTGATGCCGATGAAGTTGAGCACCAAGAGGTTGAATCCGTCATGGCGGAGCAGGGAAGCGTGAGAAATGAAAGTGTGGACGGTGACGATGACGATTACGACGATTGGGAGGGAGTGGAAAGTACAGAATTGGACGAGGCCTTCAGTGCCGCAACGGCTTTTGTGGCTGCTGCCGCTGCCGATCGACTCTCGCAGAAGGTGTCCAGTGATGCACAGCTCCAGCTATATGGGCTGTACAAAATTGCAACCGAAGGGCCCTGTAGTATGCCACAGCCTTCGGCACTGAAAATGGCGGCCCGAGCCAAATGGCTAGCATGGCAAAAATTGGGTGCTATGCCTCCTGAAGATGCAATGCAGAAGTATATTGATATTGTGACAGAGCTTTACCCAACCTGGTTAGATGGCTCGGCTTTGAGGAGCAAAAGTGGAGATGGTGTTGGCCCAAGTTCAGGGTCTCCAGAGTCCAAGGGACCAATGGGGCCTGTATTCAGCACTTTTGTATATGAAGAGGAAGCTGGCAGTGATTTAAAAATTGATGCAATTCATGGATTTGCCAGAGAAGGAGACTCCACTAATCTGCTCAAGTGTATTGAAAATGGTGTTTCAGTGAATCTGAAGGACAGTGAGGGTCGGACGCCATTACATTGGGCTGTGGATCGTGGTCACCTTGAGGTCACAGAACTGCTTGTTAGTAGGAATGCTGATGTAAATGACAAGGATGACGATGGGCAAACTCCATTGCACTATGCTGTTGTGTGTGAGAGAGAGGCCTTAGCTGAGTATTTAGTGAAGCATAATGCGGACCCAGATTTGAAGGATAATGATGGCAGTTCGTCACGTGAAATGTGCAAGTCGAACTGGCCTTCCATGCAACCTGTGGGGAATTAA 1083 0.4857 MGEWQSLIQSILLGLIFSYLLAKLISIVVSFKDDNLTITRRSISSTNHISNRSKIEPDVSPFARRPDADEVEHQEVESVMAEQGSVRNESVDGDDDDYDDWEGVESTELDEAFSAATAFVAAAAADRLSQKVSSDAQLQLYGLYKIATEGPCSMPQPSALKMAARAKWLAWQKLGAMPPEDAMQKYIDIVTELYPTWLDGSALRSKSGDGVGPSSGSPESKGPMGPVFSTFVYEEEAGSDLKIDAIHGFAREGDSTNLLKCIENGVSVNLKDSEGRTPLHWAVDRGHLEVTELLVSRNADVNDKDDDGQTPLHYAVVCEREALAEYLVKHNADPDLKDNDGSSSREMCKSNWPSMQPVGN 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0182 360 Pfam Ankyrin repeats (3 copies) 248 338 IPR002110 GO:0005515
Lele04g0182 360 SUPERFAMILY Ankyrin repeat 243 345 IPR036770 -
Lele04g0182 360 PRINTS Ankyrin repeat signature 323 337 IPR002110 GO:0005515
Lele04g0182 360 PRINTS Ankyrin repeat signature 275 290 IPR002110 GO:0005515
Lele04g0182 360 MobiDBLite consensus disorder prediction 78 98 - -
Lele04g0182 360 ProSiteProfiles Ankyrin repeat profile. 274 306 IPR002110 GO:0005515
Lele04g0182 360 SUPERFAMILY Acyl-CoA binding protein 108 198 IPR035984 GO:0000062
Lele04g0182 360 PRINTS Acyl-coA-binding protein signature 176 193 IPR000582 GO:0000062
Lele04g0182 360 PRINTS Acyl-coA-binding protein signature 155 170 IPR000582 GO:0000062
Lele04g0182 360 PRINTS Acyl-coA-binding protein signature 132 150 IPR000582 GO:0000062
Lele04g0182 360 MobiDBLite consensus disorder prediction 345 360 - -
Lele04g0182 360 MobiDBLite consensus disorder prediction 205 225 - -
Lele04g0182 360 ProSiteProfiles Ankyrin repeat profile. 307 339 IPR002110 GO:0005515
Lele04g0182 360 Gene3D - 103 215 IPR014352 -
Lele04g0182 360 ProSiteProfiles Acyl-CoA-binding (ACB) domain profile. 109 199 IPR000582 GO:0000062
Lele04g0182 360 SMART ANK_2a 307 336 IPR002110 GO:0005515
Lele04g0182 360 SMART ANK_2a 274 303 IPR002110 GO:0005515
Lele04g0182 360 ProSiteProfiles Ankyrin repeat region circular profile. 274 306 - -
Lele04g0182 360 ProSiteProfiles Ankyrin repeat region circular profile. 307 339 - -
Lele04g0182 360 Pfam Acyl CoA binding protein 110 190 IPR000582 GO:0000062
Lele04g0182 360 Gene3D - 234 352 IPR036770 -
Lele04g0182 360 MobiDBLite consensus disorder prediction 332 360 - -
Lele04g0182 360 PANTHER ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 6 2 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0182 Lele-ChrLele04 1016299 1019995 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0182 1 356 Acyl Lipid Metabolism Gene Families AT5G53470 62.465 1.37e-143 408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0182 04 1016299 1019995 Lele04g0182 04 1016299 1019995 ECH
Lele01g0185 01 1033782 1037418 Lele04g0182 04 1016299 1019995 hybridization
Lele02g0185 02 1006770 1010462 Lele04g0182 04 1016299 1019995 hybridization