Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0185 ATGGGTGAGTGGCAGTCACTTATCCAATCCATTTTTCTCGGTCTCATTTTCTCTTTCCTTCTTGCCAAGCTCATATCCATCGTCGTATCATTCAAGGACGATAATCTGACTATAACTCGCCGCAGTATCAGTAGCACCGACCATATAAGTAATCGGAGCAAGATTGAACCCGATGTCAACCCGTTTGCGCGCAGGCCTGATGCCGATGAAGCCGAGCACCAAGAGATTGAATCCATCATGGCGGAGCAGGGCAGCGTGAGAAATGAAAGTCTGGACGGCGATGATGACGATGACGACGATTGGGAGGGAGTGGAAAGTACAGAATTGGACGAGGCCTTCAGTGCCGCAACGGCTTTTGTGGCTGCTGCCGCTGCCGATCGGCTCTCGCAGAAGGTGTCCAGTGATGCACAGCTCCAGCTATATGGGCTGTACAAAATTGCAACCGAAGGACCCTGTAGTACGCCACAGCCTTCGGCACTGAAAATGACGGCCCGAGCCAAATGGCAAGCATGGCAAAAATTGGGCGCTATGCCTCCTGAAGATGCAATGCAGAAGTATATTGATATTGTGACAGAGCTTTACCCAACCTGGTTAGATGGCTCGGCTTTGAGGAGCAAAAGTGGATATGGTGTTGGCCCAAGTTCAGGGTCTTCAGAGTCCAAGGGACCAATGGGGCCTGTATTCAGCACTTTTGTGTGTGAAGAGGAAGCTGGAAGTGATTTAAAAATTGATGCAATTCATGGATTTGCCAGAGAAGGAGACTCCACTAATCTGCTCAAGTGTATTGAAAATGGTGTTTCGGTGAATCTGAAGGACAGTGAGGGTCGGACACCATTACACTGGGCTGTGGATCGTGGTCACCTTGAGGTCACAGAACTGCTCGTTAGTAGGAATGCTGACGTAAATGACAAGGATGATGATGGGCAAACTTCATTGCACTATGCTGTTGTGTGTGAGAGGGAGGCCATAGCTGAGTATTTAGTGAAGCATAATGCGGACCCAGATTTGAAGGATAATGATGGCAGTTCGTCACGTGACATGTGCAAGTCGAACTGGCCCTGCATGCAACCTGTGGGGAACTAA 1083 0.4931 MGEWQSLIQSIFLGLIFSFLLAKLISIVVSFKDDNLTITRRSISSTDHISNRSKIEPDVNPFARRPDADEAEHQEIESIMAEQGSVRNESLDGDDDDDDDWEGVESTELDEAFSAATAFVAAAAADRLSQKVSSDAQLQLYGLYKIATEGPCSTPQPSALKMTARAKWQAWQKLGAMPPEDAMQKYIDIVTELYPTWLDGSALRSKSGYGVGPSSGSSESKGPMGPVFSTFVCEEEAGSDLKIDAIHGFAREGDSTNLLKCIENGVSVNLKDSEGRTPLHWAVDRGHLEVTELLVSRNADVNDKDDDGQTSLHYAVVCEREAIAEYLVKHNADPDLKDNDGSSSRDMCKSNWPCMQPVGN 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0185 360 PRINTS Ankyrin repeat signature 323 337 IPR002110 GO:0005515
Lele01g0185 360 PRINTS Ankyrin repeat signature 275 290 IPR002110 GO:0005515
Lele01g0185 360 SUPERFAMILY Ankyrin repeat 244 350 IPR036770 -
Lele01g0185 360 PRINTS Acyl-coA-binding protein signature 155 170 IPR000582 GO:0000062
Lele01g0185 360 PRINTS Acyl-coA-binding protein signature 176 193 IPR000582 GO:0000062
Lele01g0185 360 PRINTS Acyl-coA-binding protein signature 132 150 IPR000582 GO:0000062
Lele01g0185 360 Gene3D - 234 352 IPR036770 -
Lele01g0185 360 ProSiteProfiles Ankyrin repeat profile. 274 306 IPR002110 GO:0005515
Lele01g0185 360 Pfam Ankyrin repeats (3 copies) 248 338 IPR002110 GO:0005515
Lele01g0185 360 ProSiteProfiles Ankyrin repeat region circular profile. 307 339 - -
Lele01g0185 360 SUPERFAMILY Acyl-CoA binding protein 108 198 IPR035984 GO:0000062
Lele01g0185 360 Pfam Acyl CoA binding protein 110 190 IPR000582 GO:0000062
Lele01g0185 360 MobiDBLite consensus disorder prediction 333 360 - -
Lele01g0185 360 ProSiteProfiles Ankyrin repeat profile. 307 339 IPR002110 GO:0005515
Lele01g0185 360 ProSiteProfiles Acyl-CoA-binding (ACB) domain profile. 109 199 IPR000582 GO:0000062
Lele01g0185 360 ProSiteProfiles Ankyrin repeat region circular profile. 274 306 - -
Lele01g0185 360 Gene3D - 103 210 IPR014352 -
Lele01g0185 360 SMART ANK_2a 307 336 IPR002110 GO:0005515
Lele01g0185 360 SMART ANK_2a 274 303 IPR002110 GO:0005515
Lele01g0185 360 MobiDBLite consensus disorder prediction 80 102 - -
Lele01g0185 360 PANTHER ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 6 2 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0185 Lele-ChrLele01 1033782 1037418 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0185 1 356 Acyl Lipid Metabolism Gene Families AT5G53470 62.745 2.41e-145 413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0185 01 1033782 1037418 Lele01g0185 01 1033782 1037418 ECH
Lele01g0185 01 1033782 1037418 Lele03g0189 03 1009531 1013125 hybridization
Lele01g0185 01 1033782 1037418 Lele04g0182 04 1016299 1019995 hybridization