Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1170 ATGGAGAGATTGCAAGGAGGGTTGAGCCACCTGTTGATGATGGTGTTTCTGCATAACTTCTCGTCCTTCATGGTGGTTCCGGCCATCACCGACGTCACCATGGCCGCCCTTTGTCCCGGACAAGACGAGTGCTCTCTCGCCATTTACCTCACTGGTTTTCAGCAAGCGGTCATAGGACTGGGAACGCTCGTGATGATGCCTCTTTTGGGTAATTTCTCTGATATATATGGCAGAAAAGCTATTCTCACAATCCCCATGACCCTCACCATAATTCCTTTAGCCATATTAGCTTACAGCAGGACACAGAAATTCGTCTACGCTTACTACGTCTTCAAGACTCTAGTTTCCATGATTTGTGAAGGAAGTGTCCCTTGCCTCGCTCTAGCTTACGTGGCGGATAATGTGAGCGAAGGGGATCGAGCTGCTGCATTTGGAATCCTTACGGGTATTGGTTCCGCTGCGTTCGTCTGCGGCACATTATCGGCTCGATTCCTTTCCACTGCCCACACTTTTCAGGTTTCTACTCTTGTGGCGGTGATCGCAGCGGTGTACATGAGAGTGTTCCTTCCGGATTCAACCGTCGATCACAATCTTTCTGCTCCACTCACTTCAGAAGCAAAGCTCAAGACTGCTAAGGTCGATGCCCTGCCAAAATCAGATGTGAATCCTTTCAAAAAGTTGCCTTCATTGAAGGACTTAATCTCATTGCTGGGTAGTAGCTTGATTGTTACGCAAGCCGCAATTGTTGCATTTTTCAACAACCTTGCCGATGTTGGCCTTCATGGTTCTTTAATGTATTACTTAAAGGCTCGGTTTCATTTTGACAAGAATCAGTTTGCTGATTTAATGGTCATTTCTGGGATTGCTGGTACTGTTTCACAGCTTGTTCTTATGCCCATTCTGGTTCCAACTTTGGGAGAGGCAAGGCTGCTTTCAATAGGACTTTTTTTCAGCTGTCTACATATGTTCATTTATAGCATTGCATGGGCTTCCTGGGTTCCTTATGCTGCTGCAATGTTCTCAGTATTAATTGTTTTTGCACATCCTTGTATGCGCAGTCTTGTATCCAAACATGTTCGTCCCTGTGAGCAGGGAAAGGCTCAAGGCTGTGTTTCAGGCGTATGTTCATTTGCGCATGTTGTTTCTCCATTGGCTTTCTCTCCTTTAACAGCTCTCTTCCTGTCTGAAAGGGCACCTTTCAACTTTCCTGGCTTCAGTATAATGTGCATTGGATTTGCTTCGATGGTCGCTTTTGTTCAAAGTACGTTCATATGGGGGGCTCCTCCCATTTCAAGTGACATGAATGGAAATTGCCTGGAGCCCTAA 1326 0.4608 MERLQGGLSHLLMMVFLHNFSSFMVVPAITDVTMAALCPGQDECSLAIYLTGFQQAVIGLGTLVMMPLLGNFSDIYGRKAILTIPMTLTIIPLAILAYSRTQKFVYAYYVFKTLVSMICEGSVPCLALAYVADNVSEGDRAAAFGILTGIGSAAFVCGTLSARFLSTAHTFQVSTLVAVIAAVYMRVFLPDSTVDHNLSAPLTSEAKLKTAKVDALPKSDVNPFKKLPSLKDLISLLGSSLIVTQAAIVAFFNNLADVGLHGSLMYYLKARFHFDKNQFADLMVISGIAGTVSQLVLMPILVPTLGEARLLSIGLFFSCLHMFIYSIAWASWVPYAAAMFSVLIVFAHPCMRSLVSKHVRPCEQGKAQGCVSGVCSFAHVVSPLAFSPLTALFLSERAPFNFPGFSIMCIGFASMVAFVQSTFIWGAPPISSDMNGNCLEP 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1170 441 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 8 421 - -
Lele03g1170 441 Gene3D MFS general substrate transporter like domains 8 422 IPR036259 -
Lele03g1170 441 CDD MFS_SLC46_TetA_like 11 421 - -
Lele03g1170 441 Pfam Major Facilitator Superfamily 11 383 IPR011701 GO:0022857|GO:0055085
Lele03g1170 441 SUPERFAMILY MFS general substrate transporter 11 418 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1170 Lele-ChrLele03 6851742 6857099 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g1170 1 440 Organic Solute Cotransporters AT2G16990 46.154 2.20e-121 358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g1170 03 6851742 6857099 Lele03g1170 03 6851742 6857099 ECH
Lele01g1157 01 6877242 6883149 Lele03g1170 03 6851742 6857099 hybridization
Lele02g1423 02 18545182 18550560 Lele03g1170 03 6851742 6857099 hybridization