Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1423 ATGGAGAGATTGAGTGGAGGGTTGAGCCACCTGTTGATGATGCTGTTTCTGCATAACTTCTCCTCCTTCATGGTGGTTCCAGCCATCACCGACGTCACCATGGCAGCCCTTTGTCCCGGCCAAGACAAGTGCTCTCTCGCCATTTACCTCACTGGTATCCAGCAAGCGGTCATAGGACTGGGAACGCTCGTGATGATGCCTCTCTTGGGCAATTTCTCTGATATATATGGCAGAAAGGCTATTCTCACAATCCCCATGATCCTTGTCATAATTCCTTTAGCCATATTAGCTTACAGCAGGACACAGAAATTTGTCTACGCTTACTACGTCTTCAAGACTCTCGTTTCCATGATTTGTGATGGAAGTGTTCCTTGCCTCGCTCTAGCTTACGTGGCGGATAATGTGAGCGAGGGGCATAGAGCTGCTGCATTTGGAATCCTTACGGGTATTGGGTCCGCTGCGTTCGTCTGCGGCACATTATCGGCTCGATTCCTTTCCACTGCCCACACTTTTCAGGTTTCTACTATTGTGGCGGTGATTGGAGCGGTGTACATGAGAGTGTTCCTTCCGGATTCAACCATCGATCACAATCTTTCTGTTCCACTCACTTCTGAAGCAAAGCTCAAGACTGCTAAAACCGATGCTCTGCCAAAATCAAATGTGAATCCCTTTAAAACGTTTCCTTCGTTGAAGGACTTAACCTCATTGCTGGGTAGTAGCTTGATTGTTACGCAAGCAGCAATTGTTGCGTTTTTTACCAACCTTGCCGATGTTGGCCTTCACGGTTCATTAATGTATTACTTAAAGGCTCGGTTTCATTTTAACAAGAATCAGTTTGCTGATTTAATGGTCATTTCTGGGATTGCTGGTACTGTTTCACAGCTTGTTCTTATGCCCATTCTGGTTCCAACTTTGGGAGAGGCAAGGCTGCTTTCAATAGGACTTTTTTTCAGCTTTCTACATATGTTCATTTACGGCATTGCATGGGCTTCCTGGGTTCCTTATGGTGCTGCAATGTTCTCAGTATTAATTGTTTTTGCACATCCTTGTATGCGTAGCCTCGTATCCAAACATGTTCGTCCCTGTGAGCAGGGAAAGGCTCAAGGTTGTGTTTCAGGCGTATGTTCTTTTGCGCATGTTGTTTCTCCGTTGGCCTTCTCTCCTTTAACAGCTCTCTTCCTGTCTGAAAGGGCACCTTTCAACTTCCCTGGCTTCAGTATAATGTGCATTGGCTTTGCTTCGATGGTCGCTTTTGTTCAAAGTACGTTCATATGGGGGCCTCCCCCCATTTCAAGTGACACGAACGGAAATTGCCTGGAGCCCTAA 1326 0.463 MERLSGGLSHLLMMLFLHNFSSFMVVPAITDVTMAALCPGQDKCSLAIYLTGIQQAVIGLGTLVMMPLLGNFSDIYGRKAILTIPMILVIIPLAILAYSRTQKFVYAYYVFKTLVSMICDGSVPCLALAYVADNVSEGHRAAAFGILTGIGSAAFVCGTLSARFLSTAHTFQVSTIVAVIGAVYMRVFLPDSTIDHNLSVPLTSEAKLKTAKTDALPKSNVNPFKTFPSLKDLTSLLGSSLIVTQAAIVAFFTNLADVGLHGSLMYYLKARFHFNKNQFADLMVISGIAGTVSQLVLMPILVPTLGEARLLSIGLFFSFLHMFIYGIAWASWVPYGAAMFSVLIVFAHPCMRSLVSKHVRPCEQGKAQGCVSGVCSFAHVVSPLAFSPLTALFLSERAPFNFPGFSIMCIGFASMVAFVQSTFIWGPPPISSDTNGNCLEP 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1423 441 Pfam Major Facilitator Superfamily 11 383 IPR011701 GO:0022857|GO:0055085
Lele02g1423 441 CDD MFS_SLC46_TetA_like 11 421 - -
Lele02g1423 441 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 8 422 - -
Lele02g1423 441 Gene3D MFS general substrate transporter like domains 8 423 IPR036259 -
Lele02g1423 441 SUPERFAMILY MFS general substrate transporter 11 419 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1423 Lele-ChrLele02 18545182 18550560 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1423 1 440 Organic Solute Cotransporters AT2G16990 46.035 6.55e-119 352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g1423 02 18545182 18550560 Lele02g1423 02 18545182 18550560 ECH
Lele02g1423 02 18545182 18550560 Lele03g1170 03 6851742 6857099 hybridization
Lele02g1423 02 18545182 18550560 Lele04g1403 04 19422156 19427214 hybridization