Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele03g0965 | ATGTCTGCAGTCGAAGCGGAGAAGAATGTCGAAGAAGAGAAGGAGGTGGTGAGAAGGGGAGAGCTCTTGTTCTGCGGGGGTACGAGTTGGGATATTATTGGTCGTCGTAAAGGTCCAGCTGACGGCAACTTGGTCTCTCCATCTCGGCTTCGCCCTCTCGTTAGTGTTGATATTCGATTCGTTGCATCTGGATGTGGTGAGTTTCATCTTTTATTAGATAGAGGACATGCCGATGTTTTCACTATTCTGTCTCCAAGATTATCATCTTGTCATTGCGTGGCATTAGATTTTGAGGGGCGCTGCTATACATGGGGACGCAATGAGAAGGGGCAACTTGGTCATGGGGATACCATTCAGCGTGATAGGCCAACCGTGGTATCTGAAATTTCGAAACATAAAATTGTCAAAGCTGGAGCAGGGAGGAACCACACGGTGGTTGTTACAGAGGATGGACATTCCCTTGCTTTTGGTTGGAATAAGCATGGACAGCTAGGTTCAGGTTCTGTGAAAAATGAAATTGAATCATCTCCTGTTCGCTGTCTTGTGTCAGAAGTCAATTATGCTACTTGTGGTGGTGACTTCACTGTGTGGTTATCTTCCGTTGAAGGAGCTTCTATACTTACTGCAGGGCTCCCACAGTATGGGCAGCTGGGACATGGAACAGACAATGAGTATAATTCCAAAGACAGTTCTGTGAGGTTGGTTTATGAAGCCCAACCACGTCCGCGGGCAATTGCTAAGCTATCTGGTGAAACAATTGTCAAAGTGGCATGTGGAACAAATCACACAGTGGCGGTGGATAAAAATGGCTTCGTTTACACGTGGGGTTTTGGTGGTTATGGAAGGCTGGGGCATAGGGAGCAGAAGGATGAGTGGTCCCCACGTCGTGTGGATGCTTTTCGTGACAGAAATGTTCTGCCTCCTGATGCTGTGATTTCAGCTGGTTCTGTTAACTCTGCATGCACTGCAGGTGGAGGGCAATTGTATGTGTGGGGCAAAATAAAGAATACAGGAGATGATTGGATGTATCCTAAGCCTCTGATGGATTTAAGTGGCTGGAACTTGCGATGCATGGATTCAGGCAATATGCACCATTTTGTTGGGGCTGATTCTTCGTGTATAAGTTGGGGCCATGCTCAACATGGTGAACTGGGATATGGACCTAATGCACAGAAGTCTTCAGCAGTACCCAAAAAGGTGGATATTCTTGAGGGCATGCATGTTATGGGTGTTGCTTGTGGCATGGGCCATTCCATGGTCGTTGTTGATGGAACAAATGTTGGTGAACGTCTTGACCAGCTTGATATATACGATGGGAAAGCTTCTGGTGAAGTATATGAGGAACCAGGAAATAAAGCTCCAGTGCCCAAGCAGAGTACCAAAAAGGGTGCAAAAGGTGGTGACAACTCCAAGAAGAAGAAGAAAGTGAAAGAATCATCTGAATCGGAGGAGGAAGAGGATGACGGAGCAAGTGACGATGAGGTGCAGGAGAATGGCACGGCCGAGGGGAAAAGGAAACGCAGGGGAAATAATTCTGATAAGGCGAGAGGTAAAGCTAAAGGTTCTGGCCCCGGGAGAAACCGGCCTCCAGTAAAAACGGGTAAGAGAGGAAGACCCCGCAAGTCTTGA | 1629 | 0.4739 | MSAVEAEKNVEEEKEVVRRGELLFCGGTSWDIIGRRKGPADGNLVSPSRLRPLVSVDIRFVASGCGEFHLLLDRGHADVFTILSPRLSSCHCVALDFEGRCYTWGRNEKGQLGHGDTIQRDRPTVVSEISKHKIVKAGAGRNHTVVVTEDGHSLAFGWNKHGQLGSGSVKNEIESSPVRCLVSEVNYATCGGDFTVWLSSVEGASILTAGLPQYGQLGHGTDNEYNSKDSSVRLVYEAQPRPRAIAKLSGETIVKVACGTNHTVAVDKNGFVYTWGFGGYGRLGHREQKDEWSPRRVDAFRDRNVLPPDAVISAGSVNSACTAGGGQLYVWGKIKNTGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQHGELGYGPNAQKSSAVPKKVDILEGMHVMGVACGMGHSMVVVDGTNVGERLDQLDIYDGKASGEVYEEPGNKAPVPKQSTKKGAKGGDNSKKKKKVKESSESEEEEDDGASDDEVQENGTAEGKRKRRGNNSDKARGKAKGSGPGRNRPPVKTGKRGRPRKS | 542 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele03g0965 | 542 | Gene3D | - | 236 | 434 | IPR009091 | - | |
| Lele03g0965 | 542 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 204 | 269 | IPR000408 | - | |
| Lele03g0965 | 542 | MobiDBLite | consensus disorder prediction | 442 | 542 | - | - | |
| Lele03g0965 | 542 | ProSitePatterns | Regulator of chromosome condensation (RCC1) signature 2. | 411 | 421 | IPR000408 | - | |
| Lele03g0965 | 542 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 151 | 201 | IPR000408 | - | |
| Lele03g0965 | 542 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 371 | 424 | IPR000408 | - | |
| Lele03g0965 | 542 | ProSitePatterns | Regulator of chromosome condensation (RCC1) signature 2. | 256 | 266 | IPR000408 | - | |
| Lele03g0965 | 542 | Gene3D | - | 6 | 235 | IPR009091 | - | |
| Lele03g0965 | 542 | ProSitePatterns | Regulator of chromosome condensation (RCC1) signature 2. | 137 | 147 | IPR000408 | - | |
| Lele03g0965 | 542 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 270 | 325 | IPR000408 | - | |
| Lele03g0965 | 542 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 99 | 150 | IPR000408 | - | |
| Lele03g0965 | 542 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 269 | 307 | IPR000408 | - | |
| Lele03g0965 | 542 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 98 | 147 | IPR000408 | - | |
| Lele03g0965 | 542 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 150 | 196 | IPR000408 | - | |
| Lele03g0965 | 542 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 375 | 421 | IPR000408 | - | |
| Lele03g0965 | 542 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 207 | 266 | IPR000408 | - | |
| Lele03g0965 | 542 | PANTHER | PROTEIN RCC2 | 87 | 522 | IPR028641 | - | |
| Lele03g0965 | 542 | PRINTS | Chromosome condensation regulator RCC1 signature | 100 | 116 | IPR000408 | - | |
| Lele03g0965 | 542 | PRINTS | Chromosome condensation regulator RCC1 signature | 134 | 147 | IPR000408 | - | |
| Lele03g0965 | 542 | PRINTS | Chromosome condensation regulator RCC1 signature | 256 | 272 | IPR000408 | - | |
| Lele03g0965 | 542 | PRINTS | Chromosome condensation regulator RCC1 signature | 153 | 169 | IPR000408 | - | |
| Lele03g0965 | 542 | PRINTS | Chromosome condensation regulator RCC1 signature | 272 | 286 | IPR000408 | - | |
| Lele03g0965 | 542 | SUPERFAMILY | RCC1/BLIP-II | 82 | 424 | IPR009091 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele03g0965 | Lele-ChrLele03 | 5617833 | 5622510 | Dispersed/Wgd |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lele03g0965 | 03 | 5617833 | 5622510 | Lele03g0965 | 03 | 5617833 | 5622510 | ECH | |
| Lele01g0968 | 01 | 5599739 | 5604401 | Lele03g0965 | 03 | 5617833 | 5622510 | hybridization | |
| Lele02g0971 | 02 | 5902056 | 5906941 | Lele03g0965 | 03 | 5617833 | 5622510 | hybridization |