Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0725 ATGGCTGTGTCGTCCACCACCGCCACGGTGTCCATTGCCGGCAACAATGTTCACTCGACTCAGTCACCCAAGTTCGGATTCTCAAATTTTGTCGGCTTCAGCGCCAAGCCCCGTAGAATTTGTATCAGATGCTCCACGGCTAATGATTCCTCCTCGACTGACACCACTGCCACTCAAGACGATTCTGAGACCGCCATTGAAGTTCCAGAAGAATCTTCCTCCCTGATTTCTGCCCTTAACGTCGAAAGGGCTCTCCGTGGCATACCAATTACAGATATTGACCATTATGGTAGACTCGGCATTACCAGAGGAAGTTCATTCGAAAAGGTGGCAGTAGCATATAACAATAAGGTTGAAGAGTTGAAGAAGCAAGAATTGGAGGAAGACGAGCTGAACAAGAAACTGGAACATCTCAAAGAATCATATTCAATTTTATCGTCCAAACAAGAGAGAAGAATTTATGACTGGAGTTTGGCTAGGACAGAGAATTCAGAACAATACGTTTGGCCCTTTGAGGTTGACACATTACAAACTCCTCAAGGCACTCCTCCCCCACAGGAGCCAGAGGACGAGGGACCAACCAGAGTCGTTGGGTACTTCCTATTGGGATGGATATTAATATCATTTCTGCTATCAATCGCACTAAGTTAA 651 0.4593 MAVSSTTATVSIAGNNVHSTQSPKFGFSNFVGFSAKPRRICIRCSTANDSSSTDTTATQDDSETAIEVPEESSSLISALNVERALRGIPITDIDHYGRLGITRGSSFEKVAVAYNNKVEELKKQELEEDELNKKLEHLKESYSILSSKQERRIYDWSLARTENSEQYVWPFEVDTLQTPQGTPPPQEPEDEGPTRVVGYFLLGWILISFLLSIALS 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0725 216 FunFam NAD(P)H-quinone oxidoreductase subunit U chloroplastic 76 167 - -
Lele03g0725 216 MobiDBLite consensus disorder prediction 47 69 - -
Lele03g0725 216 Coils Coil 114 148 - -
Lele03g0725 216 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT U, CHLOROPLASTIC 1 215 IPR044199 GO:0009535|GO:0010598
Lele03g0725 216 SUPERFAMILY Chaperone J-domain 92 159 IPR036869 -
Lele03g0725 216 ProSiteProfiles dnaJ domain profile. 94 158 IPR001623 -
Lele03g0725 216 Gene3D DnaJ domain 81 169 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0725 Lele-ChrLele03 4288447 4289545 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0725 03 4288447 4289545 Lele03g0725 03 4288447 4289545 ECH
Lele01g0727 01 4275985 4277083 Lele03g0725 03 4288447 4289545 hybridization
Lele02g0710 02 4302742 4303907 Lele03g0725 03 4288447 4289545 hybridization