Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0727 ATGGCTGTGTCGTCCACCACCGCCACGGTGTCGATCGCCTGCAACAATGTTCACTCGACTCAGGCACCCAAGTTCGGATTCTCAACTTTTGTCGGCTTCAGCACCAAGCCCCGTAGAATTTGTATCAGATGCTCCACGGCTAATGATTCCTCCTCGACTGACGCCACTGCCACTCAAGACGATTCTGAGATCGCCATTGAAGTTCCAGAAGAACCTTCCTCCCTGATTTCTGCCCTTAACGTCGAAAGGGCCCTCCGTGGCATACCAATTACAGATATTGACCATTATGGTAGACTCAGCATTCCCAGAGGAAGTTCGTTCGAAAAGGTGGCAGTAGCATATAACAACAAGGTTGAAGAGTTGAAGAAGGAAGGATTGGAGGAAGACGAGCTGAACAAGAAACTGGAACATCTCAAAGAATCATATTCAATTTTATCGTCCAAACAAGAGAGAAGAATTTATGACTGGAGTTTGGCTAGGACAGAGAATTCAGAACAATACGTTTGGCCCTTTGAGGTTGACACATTACAAACTCCTCAAGGCACTCCTCCCCCACAGGAGCCAGAGGACGAGGGACCGACGAGAGTGGTTGGGTACTTCCTATTGGGATGGATATTAATATCATTTCTGCTATCAATCGCGCTAAGTTAA 651 0.4716 MAVSSTTATVSIACNNVHSTQAPKFGFSTFVGFSTKPRRICIRCSTANDSSSTDATATQDDSEIAIEVPEEPSSLISALNVERALRGIPITDIDHYGRLSIPRGSSFEKVAVAYNNKVEELKKEGLEEDELNKKLEHLKESYSILSSKQERRIYDWSLARTENSEQYVWPFEVDTLQTPQGTPPPQEPEDEGPTRVVGYFLLGWILISFLLSIALS 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0727 216 Coils Coil 121 148 - -
Lele01g0727 216 FunFam NAD(P)H-quinone oxidoreductase subunit U chloroplastic 76 167 - -
Lele01g0727 216 SUPERFAMILY Chaperone J-domain 92 159 IPR036869 -
Lele01g0727 216 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT U, CHLOROPLASTIC 1 215 IPR044199 GO:0009535|GO:0010598
Lele01g0727 216 Gene3D DnaJ domain 82 169 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0727 Lele-ChrLele01 4275985 4277083 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0727 01 4275985 4277083 Lele01g0727 01 4275985 4277083 ECH
Lele01g0727 01 4275985 4277083 Lele03g0725 03 4288447 4289545 hybridization
Lele01g0727 01 4275985 4277083 Lele04g0727 04 4458298 4459434 hybridization