Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0603 ATGGCTTTAGCTATACACCCAGCGAGCCTTTGTCCCTTTTCGCCCACTGGTAATGGTAATAGCGATCTCTTCTTTTTCAGAAACCGCAGCAGGATAATTCTAACCCCGAAGAAATGCAGAGTAGGAGTATCTCAGCATAAACGAGAAATTTCATGTTGTTCTCTAGAATCCTTTCCACAACGGAGGATTTGCAGAAGGGATTTGGCTTTGGTGGTGTTGGGCCTCTCTTCGGTGTCCATAACTTTGCCATTTTCTGCGACGCTTGCTGATGAAGAGCTGAAAATGGCTTCGTTCATGGATGAAATAAATGCTTATTCTTATTTGTACCCTGTGGAATTGCCATCTAAGAAGTTTCTCTTCAAATGGGTAGAATCCAGAAAGCCAGAACGATATTCATCAGCTGCACCACTTTCTCCTGATGCTCGCCTGCGTATTGTGTCTGAGCGTGTTGATATTATCGATAATCTCATAATCTCTGTTACAATAGGTCCACCAAATTCAAAGTTTATAAAATCAAGTGACAAGAGTACGTGGACTGCAAAAGATGTTGCTGACTCAGTATTGTCTGACAAGTCCGCTCTGCGGGTCACCTCAAGCCAGCGCTTAGCTGAGAGTTCAGTTCTTGATACACATTCTAGCGAAATTGATGGTGAGCGTTACTGGTATTATGAATACCTTGTTCGGAAATCACCAACAAGGCTAGACCAAGAATCAAATATATATCGTCACTATCTTTCTTCAACAGCCGAGAGAGATGGTTATCTGTATTCTTTGAGTGCTTCAACCCTCAGCCCAAAGTGGAAACAAATGGGACCTTTCCTTGAAAAAGCGGTGAATTCTTTCCGTCTAGCCAGTCCAACAGAAGATTATGTTCCTCCATACAAAGATCCATGGAGATTTTGGTGA 906 0.426 MALAIHPASLCPFSPTGNGNSDLFFFRNRSRIILTPKKCRVGVSQHKREISCCSLESFPQRRICRRDLALVVLGLSSVSITLPFSATLADEELKMASFMDEINAYSYLYPVELPSKKFLFKWVESRKPERYSSAAPLSPDARLRIVSERVDIIDNLIISVTIGPPNSKFIKSSDKSTWTAKDVADSVLSDKSALRVTSSQRLAESSVLDTHSSEIDGERYWYYEYLVRKSPTRLDQESNIYRHYLSSTAERDGYLYSLSASTLSPKWKQMGPFLEKAVNSFRLASPTEDYVPPYKDPWRFW 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0603 301 SUPERFAMILY Mog1p/PsbP-like 96 283 IPR016123 -
Lele03g0603 301 PANTHER - 46 284 - -
Lele03g0603 301 Pfam PsbP 97 282 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Lele03g0603 301 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 83 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0603 Lele-ChrLele03 3552851 3556701 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0603 03 3552851 3556701 Lele03g0603 03 3552851 3556701 ECH
Lele01g0601 01 3532787 3536639 Lele03g0603 03 3552851 3556701 hybridization
Lele02g0590 02 3547045 3549820 Lele03g0603 03 3552851 3556701 hybridization