Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0601 ATGGCTTTAGCTATACACTCAGCGAGCCTTTGTCCCTTCGCGCCCACTGGTAATGGTAATAGCGATCTCTTCTTTTTCAGAAACCGCAGCAGGATAATTCTAACCCCGAAGAAATGCGGAGTAGGAGTATCTCAGCATAAACGAGAAATTTCATGTTGTTCTCTAGAATCCTTTCCACAACGGAGGATTTGCAGAAGGGATTTGGCTTTGGTGGTGTTGGGCCTCTCTTCGGTGTCCATAACTTCGCCATTTTCTGCGACTCTTGCTGATGAAGAGCTGAAAATGGCTTCGTTCATGGATGAAATAAATGCTTATTCTTATTTGTACCCTGTGGAGTTGCCATCTAAGAAGTTTCTCTTCAAATGGGTGGAATCCAGAAAGCCAGAACGTTATTCATCAGCTGCACCACTTTCTCCTGATGCTCGCCTGCGTATTGTGTCTGAGCGTGTTGATATTATCGATAATCTCATAATCTCTGTTACAATAGGTCCACCAAATTCAAAGTTTATAAAATCAAGTGACAAGAGTACGTGGACTGCAAAAGATGTTGCTGACTCAGTTTTGTCTGACAAGTCGGCTCTGCGGGTCACCTCAAGCCAGCGCTTAGCTGAGAGTTCAGTTCTTGATACACATTCTAGCGAAATTGATGGTGAGCGTTACTGGTATTATGAATACCTTGTTCGGAAATCACCAACAAGGCTAGACCAAGAATCAAATATATATCGGCACTATCTTTCTTCAACAGCCGAGAGAGATGGTTATCTGTATTCTTTGAGTGCTTCAACCCTCAGCCCAAAGTGGAAACAAATGGGACCTTTCCTTGAAAAAGCAGTGAATTCTTTCCGTCTAGTCAGTCCAACCGAAGATTATGTTCCTCCATACAAAGATCCATGGAGATTTTGGTGA 906 0.4305 MALAIHSASLCPFAPTGNGNSDLFFFRNRSRIILTPKKCGVGVSQHKREISCCSLESFPQRRICRRDLALVVLGLSSVSITSPFSATLADEELKMASFMDEINAYSYLYPVELPSKKFLFKWVESRKPERYSSAAPLSPDARLRIVSERVDIIDNLIISVTIGPPNSKFIKSSDKSTWTAKDVADSVLSDKSALRVTSSQRLAESSVLDTHSSEIDGERYWYYEYLVRKSPTRLDQESNIYRHYLSSTAERDGYLYSLSASTLSPKWKQMGPFLEKAVNSFRLVSPTEDYVPPYKDPWRFW 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0601 301 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 83 283 - -
Lele01g0601 301 PANTHER - 52 283 - -
Lele01g0601 301 Pfam PsbP 97 282 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Lele01g0601 301 SUPERFAMILY Mog1p/PsbP-like 96 283 IPR016123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0601 Lele-ChrLele01 3532787 3536639 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0601 01 3532787 3536639 Lele01g0601 01 3532787 3536639 ECH
Lele01g0601 01 3532787 3536639 Lele03g0603 03 3552851 3556701 hybridization
Lele01g0601 01 3532787 3536639 Lele04g0609 04 3691987 3693897 hybridization