Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0566 ATGGCAGGCCTGGTCTATGAAGCCAAATTCGTTGACGGCCATGAAATCATGAAGATTTTTGCAACTGAAGGCGTTGGATTCCTTTTATCTTGTGATGGAAAGGTACCTCTGTCATCATGCAATGGGAAAACCATCTTCCTATTTTTCTCTGCAAACTGGTGCAGGCCTTGTAGAACATTAGTTCCTCTTCTGGTTGAACTTTATGAAACACTGAAAAAGAAAGGCAAGAGTGTAGAGATCATTTTCATCTCCTTTGATCACGATGAGAATGGTTTTGATCAACACTTCAAGAACATGCCATGGCTTGCAGTGCCATTTGATGCAAATTTGCACAGAAGGCTGATCAACAGGTTTCAAGTCCATCGAATCCCATCATTTGTTCCATTATGTTCAGATGCCATAACCAATGAAGAAGATATGATTGGCTGCATCGAGGACTATGGTGCTGAAGCATTCCCTTTCACAACCAAGAGACTGCAAGAACTGAAAGCCATAGATCAAAGAAAGCAAGAAGAAGCCAATTTTGAAGAACTTTTAGCTCATGAACAACGCAATTTTCTCATCTGTGGAGAAGATAGAAAGGTACCTATATCTGAACTTGCAGGTAAAACGACAGGCCTATATTTTTGTGCTGACTGGTCTCCGCCTTGCCGTGCCTTCACCGTCCAACTTACAGACGTATACAACAATCTCATCAATGGAAAAGATCACTGCTTTGAAGTTGTTCTGATCTCAACAGATAGAGACCTCAGGGAATTCAATGAGAACAGAAGTAGTATGCCATGGCTGGCTGTACCATATATAGACAGAACAAGGCATGATCTTTGTAGAATCTTTGATGTAAAAGAGATTCCTGCTTTGGTTGTTATTGGGCCAGAGGGCAAAGTCATAACCATGAATGGGAAGTTTATGGTGTCATCATATGGTTCTGAAGCTTTCCCTTTCACTGATGATCGTATAAGGGACCTTGAAGCTGCTTTGAGAAAGGAAGGAGAGGCTTTGCCTCAGGAGGTTGAGGATGTGAAGCATGAACATGTTCTGAAATTAGACATGGCCAAAGCTTATTTATGTGATTTCTGTAAAAAACAAGGCCAGTTCTGGGCATTCTCTTGTTATGTTTGTGATTATGATCTTCACCCAAGTTGTGTGGAAAAAGAAGAAACCCGAGATATGCCTCAGAGCCCCGGGAAAAGAGATAGAGGACTGAAGAATCTTAAGGATCAATCAGAGAAGCACGAGAAAAAGAGTGCGAATGGAATTGTGGAAGTGGGAATGGACAAAGACAAGGGGAGCCAAAAATTCAAGGTAGCTGATATTCCAGGAACGGTGGCAAAAGGAGCACCGGATTTCTGTTCTGTCTATGCTGTTGCTAAAGAAAATATTCAAACAATGCGATCAGCTTCTCGTCCTGTTCCACCCAGTTCCGTTTCCAGCAAGCATAATCCAGCAAGCCTCAAAACAAAACTATCAGATAAAAAGATGCCATTGAATAATCATGCAAATGAAAAACGATCCACTGTTGCACAAAGTACATTAAAGGATGAAACTGGATCCTTCAGGTCAGTTGCAGTCACCATTGAGCAGAAGAAATTCGAATGGCAAGTCACATGGGGAAAATTCCCTACCAGTGTGCATTTATCAGTAGTTCCTGCACTTATAAAGGGCATTACAGAACTTTCTAATTTGGATACAGTTTTCATTAGAAGAAAAGGAGGTGGCCAGAAGCAAAGCAGCCTCAAAGCAGCCAAGGAGGCTGCTGGAGCACAAAAGAGAGTTGTTGCCGAAGTGAAATCACTCAATGAAACAGAAGAGAAAACAAAAGCACTTGATGCTTTAACAACCATAAACATCAGTTATAGAAAGTATTCAATCGAGGAGATTGAAGCTGCGACGGAGTACTTTGCAGAGTCATTAAAGATAGGAGAAGGGGGTTATGGTCCTGTGTATAGGTGCCATCTAGACCATACCCTGTGCAGTGAAGGTTCTACGCCCTGA 1995 0.4185 MAGLVYEAKFVDGHEIMKIFATEGVGFLLSCDGKVPLSSCNGKTIFLFFSANWCRPCRTLVPLLVELYETLKKKGKSVEIIFISFDHDENGFDQHFKNMPWLAVPFDANLHRRLINRFQVHRIPSFVPLCSDAITNEEDMIGCIEDYGAEAFPFTTKRLQELKAIDQRKQEEANFEELLAHEQRNFLICGEDRKVPISELAGKTTGLYFCADWSPPCRAFTVQLTDVYNNLINGKDHCFEVVLISTDRDLREFNENRSSMPWLAVPYIDRTRHDLCRIFDVKEIPALVVIGPEGKVITMNGKFMVSSYGSEAFPFTDDRIRDLEAALRKEGEALPQEVEDVKHEHVLKLDMAKAYLCDFCKKQGQFWAFSCYVCDYDLHPSCVEKEETRDMPQSPGKRDRGLKNLKDQSEKHEKKSANGIVEVGMDKDKGSQKFKVADIPGTVAKGAPDFCSVYAVAKENIQTMRSASRPVPPSSVSSKHNPASLKTKLSDKKMPLNNHANEKRSTVAQSTLKDETGSFRSVAVTIEQKKFEWQVTWGKFPTSVHLSVVPALIKGITELSNLDTVFIRRKGGGQKQSSLKAAKEAAGAQKRVVAEVKSLNETEEKTKALDALTTINISYRKYSIEEIEAATEYFAESLKIGEGGYGPVYRCHLDHTLCSEGSTP 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0566 664 PANTHER THIOREDOXIN 8 345 - -
Lele03g0566 664 Pfam Thioredoxin-like 42 127 IPR012336 -
Lele03g0566 664 Pfam Thioredoxin-like 202 296 IPR012336 -
Lele03g0566 664 MobiDBLite consensus disorder prediction 465 488 - -
Lele03g0566 664 SUPERFAMILY Thioredoxin-like 34 128 IPR036249 -
Lele03g0566 664 MobiDBLite consensus disorder prediction 465 484 - -
Lele03g0566 664 Gene3D Phosphorylase Kinase; domain 1 613 660 - -
Lele03g0566 664 SUPERFAMILY Cysteine-rich domain 334 386 IPR046349 -
Lele03g0566 664 ProSiteProfiles Thioredoxin domain profile. 177 325 IPR013766 -
Lele03g0566 664 MobiDBLite consensus disorder prediction 385 416 - -
Lele03g0566 664 Gene3D Glutaredoxin 23 158 - -
Lele03g0566 664 ProSiteProfiles Thioredoxin domain profile. 17 170 IPR013766 -
Lele03g0566 664 SUPERFAMILY Thioredoxin-like 193 298 IPR036249 -
Lele03g0566 664 Gene3D Glutaredoxin 178 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0566 Lele-ChrLele03 3363784 3367745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0566 576 656 Receptor kinase-like Gene Family AT5G12000 52.326 2.56e-18 87.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0566 03 3363784 3367745 Lele03g0566 03 3363784 3367745 ECH
Lele01g0563 01 3334658 3338334 Lele03g0566 03 3363784 3367745 hybridization