Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0563 ATGGCAGGCCCGGTCTATGAAGCCAAATTGGTTGACAGTCATGATATCATGAAGATTTTTGCTGCTGAAGGCATTGGATTCCTTTTATCTTGTGATGGAAAGGTACCCCTGTTATCATGCAATGGGAAAACCATCTTCCTATTTTTCTCCGCAAACTGGTGCAGTCCTTGTAGAACATTAGTTCCTCTTCTGGTTGAACTTTATGAAACACTGAAAAAGAAAGGCAAGAGTGTAGAGATCATTTTCATCTCCTTTGATCACGATGAGAATGGTTTTGATCAACACTTCAAGAGCATGCCATGGCTTGCAGTGCCATTTGATGCAAATTTGCACAGAAGGCTGATCAACAGGTTTCAAGTCCATCGAATCCCATCATTTGTTCCATTATGTTCAGATGCCATAACCAATGAAGAAGATATGATTGGCTGCATCGAGGACCATGGTGCTGAAGCATTCCCTTTCACAGCCAAGAGACTGCAAGAACTGAAAGCCATAGATCAAAGAAAGCGAGAAGAAGCCAATTTTGAAGAACTTTTAGCTCATGAACAACGCAATTTTCTCATCTGTGGAGATGATAGAAAGGTACCTATATCTGAACTTGCAGGTAAAACGATAGGCCTATATTTTTGTGCTGAATGGTCTCCGCCTTGCCGTGCCTTCACCGTCCAACTTACAGACGTATACAACAATCTCAACAATGGAAAAGATCACTGCTTTGAAGTTGTTCTGATCTCAACAGATAGAGACCTCAGGGAATTCCATGAGAACAGAAGTAGTATGCCATGGGTGGTTGTACCATATATAGACAGAACAAGGCATGATCTTTGTAGAATCTTTGATGTAAAAGAGATTCCTGCTTTGGTTGTTATTGGGCCAGAGGGCAAAGTCATAACCATGAATGGGAAGTTTATGGTGTCATCATATGGTTCTGAAGCTTTCCCTTTCACTGATGATCGTATAAGGGACCTTGAAGCTGCTTTGAGAAAGGAAGGAGAGGCTCTGCCTCAGGAGGTTGAGGATGTGATGCATGAACATGTTCTGAAATTGGACATGGCCAAAGCTTATTTATGTGATTTCTGTAAAAAACAAGGCAAGTTCTGGGCATTCTCTTGTTATGTTTGTGATTATGATCTTCACCCAAGTTGTGTGGAAAAAGTTCTCGTCCATGTCAATGTCGGAAATTCACATCATGCTTCATGTCTGTCTATCAGAAAATTCAAGGTAGCTGATATTCCAGGAACTGTGGCAAAAGGAGCACCGGATTTCTGTTCTGTCTGTGCTGTTGCTAAAGAAAAGGTTCAAACAATGCGATCAGCTTCTCGTCCTGTTCCACCCAGTTCCGTTTCCAGCAAGCATAATCCAGCAAGCCTCAAAACAAAACTATCAGATAAAAAGATGCCATTGAATGATCATGCAAATGAAAAACGATCCACTGGTGCACAAAGTACATTAAAGGATGAAACTGGATCCTTCAGGTCAGTGGCAGTGCATACTCCTCAGCAAATTCCTTCAAGTTTATTCATTTTGGACAATCAATTTGTTCTTGGCATGGTTAAATATCACTTGTCAACTGAAAGGTCAAAACTATTTGCTATTAATAAGGCAGAAGAAATTCGAATGGCAAGTCACATGGGGAAAATTTCCTACCAGATAGATGGGAACTACAGCTCTGAGTCATTGAAGTATCGAAGGGGCTCTTTGGATGTGAGCTCTCCTCTGGAATCCTTTTCATCGCATGCTGATGGACTTTTAACATCGCATGCCACGAACTTCAAAAGGGAGGAAGAATGGAGATTGGAAGAGGCAAGGCTTCCTGAGGAAGCTGCATTTGCGGTTGCAGAAAAGGAGGTGGCCAGAAGCAAAGCAGCCAAGGAGCTGGAGCACAAAAGAGAGTTGTTGCCGAAGTGA 1908 0.4203 MAGPVYEAKLVDSHDIMKIFAAEGIGFLLSCDGKVPLLSCNGKTIFLFFSANWCSPCRTLVPLLVELYETLKKKGKSVEIIFISFDHDENGFDQHFKSMPWLAVPFDANLHRRLINRFQVHRIPSFVPLCSDAITNEEDMIGCIEDHGAEAFPFTAKRLQELKAIDQRKREEANFEELLAHEQRNFLICGDDRKVPISELAGKTIGLYFCAEWSPPCRAFTVQLTDVYNNLNNGKDHCFEVVLISTDRDLREFHENRSSMPWVVVPYIDRTRHDLCRIFDVKEIPALVVIGPEGKVITMNGKFMVSSYGSEAFPFTDDRIRDLEAALRKEGEALPQEVEDVMHEHVLKLDMAKAYLCDFCKKQGKFWAFSCYVCDYDLHPSCVEKVLVHVNVGNSHHASCLSIRKFKVADIPGTVAKGAPDFCSVCAVAKEKVQTMRSASRPVPPSSVSSKHNPASLKTKLSDKKMPLNDHANEKRSTGAQSTLKDETGSFRSVAVHTPQQIPSSLFILDNQFVLGMVKYHLSTERSKLFAINKAEEIRMASHMGKISYQIDGNYSSESLKYRRGSLDVSSPLESFSSHADGLLTSHATNFKREEEWRLEEARLPEEAAFAVAEKEVARSKAAKELEHKRELLPK 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0563 635 SUPERFAMILY Cysteine-rich domain 334 391 IPR046349 -
Lele01g0563 635 SUPERFAMILY Thioredoxin-like 191 298 IPR036249 -
Lele01g0563 635 MobiDBLite consensus disorder prediction 439 456 - -
Lele01g0563 635 Gene3D Glutaredoxin 178 317 - -
Lele01g0563 635 MobiDBLite consensus disorder prediction 457 472 - -
Lele01g0563 635 MobiDBLite consensus disorder prediction 437 485 - -
Lele01g0563 635 PANTHER THIOREDOXIN 8 348 - -
Lele01g0563 635 Pfam Thioredoxin-like 202 296 IPR012336 -
Lele01g0563 635 Pfam Thioredoxin-like 42 127 IPR012336 -
Lele01g0563 635 SUPERFAMILY Thioredoxin-like 34 129 IPR036249 -
Lele01g0563 635 ProSiteProfiles Thioredoxin domain profile. 11 170 IPR013766 -
Lele01g0563 635 Gene3D Glutaredoxin 22 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0563 Lele-ChrLele01 3334658 3338334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0563 366 621 Receptor kinase-like Gene Family AT5G35380 23.826 3.30e-10 61.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0563 01 3334658 3338334 Lele01g0563 01 3334658 3338334 ECH
Lele01g0563 01 3334658 3338334 Lele03g0566 03 3363784 3367745 hybridization