Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0564 ATGGCGCGGTGTAAATGTTCCATATTTGTTTATTTTTGTCTGTTCACGGCGAAATTTGACTTCATTCATGGGGGAAGGACAAGTTCTGTTGTTACCATCTCAAACTTCAACGATGAAATAGTTCTTTACGGTGGTTTTTTCTTTTTCAGAAATCAATCAGCCATGGTTTTCTGGGTTTTTGGCTATGGTTCACTGGTGTGGAACCCAGGATTTGATTACAATGAGAAAATGGTTGGATTCATAAAGGACTATAGACGTGTATTTGATTTAGCATGTATTGATCACAGGGGTACACCTGAAAACCCTGCAAGAACTTGCACATTGGAGCCAAAAGAAGGGGCAGTTTGCGTAAGACCTATTTCATTTGTCATTCTCGTGTGGGGCACAGCGTATTGTGTTCGTGGAGGCCCTGAAAAGGAGAAACTGGCTATGCAGGAAGGAGATTCAGTGAACCCTGCTTTAACTGGAGTTATAGTATTCACATCTACCGCAGACAAAGCAAACAAATATTACCTGGGACCTGCTCCTTTGGAAGACATGGCTAGGCAAATAGCAACAGCCTTTGGTCCTTGTGGGAACAATAGAGATTATATCTTCCGTTTAGAGAAGGCCATGTTTGATATTGGACATGAGGACTATATAGTGATAGAGCTTGCTAATGAAGTGAGGAAGGTACTTGGGGCTGTGGGGAATGTGATGCCAAAGGAGACTTCTGCGGTTGGAGCAGCTCAACTTGCACAACCTTCTCACGTACCTATCCCTGCTCTCCAATTGCACCTACTTCCAGAGCCAATTGCGTAG 801 0.4345 MARCKCSIFVYFCLFTAKFDFIHGGRTSSVVTISNFNDEIVLYGGFFFFRNQSAMVFWVFGYGSLVWNPGFDYNEKMVGFIKDYRRVFDLACIDHRGTPENPARTCTLEPKEGAVCVRPISFVILVWGTAYCVRGGPEKEKLAMQEGDSVNPALTGVIVFTSTADKANKYYLGPAPLEDMARQIATAFGPCGNNRDYIFRLEKAMFDIGHEDYIVIELANEVRKVLGAVGNVMPKETSAVGAAQLAQPSHVPIPALQLHLLPEPIA 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0564 266 Pfam ChaC-like protein 58 224 IPR006840 GO:0003839|GO:0006751
Lele03g0564 266 PANTHER CATION TRANSPORT PROTEIN CHAC-RELATED 55 232 IPR006840 GO:0003839|GO:0006751
Lele03g0564 266 Gene3D - 49 208 - -
Lele03g0564 266 ProSitePatterns Glycosyl hydrolases family 5 signature. 214 223 IPR018087 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0564 Lele-ChrLele03 3355060 3357174 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0564 03 3355060 3357174 Lele03g0564 03 3355060 3357174 ECH
Lele01g0561 01 3324554 3326556 Lele03g0564 03 3355060 3357174 hybridization
Lele02g0554 02 3333509 3338360 Lele03g0564 03 3355060 3357174 hybridization