Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0513 ATGGACCGCTTGCGTCCTCGGAACAGACCGGTCTTCTTCGGATTCACCAATGCTGAGATTGAGAAAATGGAAAAGGTGCTAAAAGATTCAGGGGAAGAATCACTGGGCAAGGAGTTTTGCCAAAGACTTACTAAAAGTTTTAACCGCTCCTCTGGTCGTGCTGGCAAACCTGTCATAAAATGGACTGAGATACAGAGTTGGTTTCAGACAAGGCTTCCAGAATCAACTGAAGTCCCTAAAAATGAGTCGATTCGTATAAAAGGCCTTGAAAGTAAGGAAGGAGGAGTTATCCGAGACCCATTAGAGTTGGAATTCGAGGCGAGGTCATCAAAGGATGGAGCATGGTATGATGTTGAGAAGTTTCTTTCCCACAGATTTCTCAGCACAGGTGAAGCTGAAGTCCGCGTCAGATTTATTGGATTTGGAGCTGAGGAAGATGAGTGGGTCAATATAAAAAATGCAGTGAGAGAACGCTCAGTGCCTTTAGAAAATACTGAATGTTCCAACCTAAAAGTTGGAGACCCTGTCTTGTGCTTCCAGGAGAGGAGAGATCAAGCAATTTATTATGATGCCCATATTTTAGAGATCCAAAGGAAAATGCATGATATCAGAGGCTGCAGGTGTCTCTTCTTGATTCAGTATGATCATGACAGTGGTGAGGTACGAATCATTTCTGATAAAGTTCGCCTGAGGAGACTTTGCCGCAGACCAAGATCCTAG 720 0.4389 MDRLRPRNRPVFFGFTNAEIEKMEKVLKDSGEESLGKEFCQRLTKSFNRSSGRAGKPVIKWTEIQSWFQTRLPESTEVPKNESIRIKGLESKEGGVIRDPLELEFEARSSKDGAWYDVEKFLSHRFLSTGEAEVRVRFIGFGAEEDEWVNIKNAVRERSVPLENTECSNLKVGDPVLCFQERRDQAIYYDAHILEIQRKMHDIRGCRCLFLIQYDHDSGEVRIISDKVRLRRLCRRPRS 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0513 239 SUPERFAMILY Chromo domain-like 112 154 IPR016197 -
Lele03g0513 239 Pfam SAWADEE domain 102 220 IPR032001 GO:0003682
Lele03g0513 239 Gene3D - 101 161 - -
Lele03g0513 239 Gene3D - 162 239 - -
Lele03g0513 239 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 11 238 IPR039276 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0513 Lele-ChrLele03 3009710 3012720 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0513 03 3009710 3012720 Lele03g0513 03 3009710 3012720 ECH
Lele03g0513 03 3009710 3012720 Lele04g0510 04 3071328 3073701 ECH
Lele01g0504 01 2987533 2990606 Lele03g0513 03 3009710 3012720 hybridization
Lele02g0491 02 2948152 2949770 Lele03g0513 03 3009710 3012720 hybridization