Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0504 ATGGACCGCTTGCGTCCTCGGAACAGACCGGTCTTCTTCGGATTCACCAATGCTGAGATTGAGAAAATGGAAAAGGTGCTAAAAGATTCAGGGGAAGAATCACTGGGCAAGGAGTTTTGCCAAAGACTTACTAAAAGTTTCAACCGCTCCTCTGGTCGTGCTGGCAAACCTGTCATAAAATGGACTGAGATACAGAGTTGGTTTCAGACAAGGCTTCGAGAATCACCCGAAGTCCCTAAAAATGAGTTGATTCTTATAAAAGGCGTTGAAAGTAAGGAAGGAGTTATCCGAGACCCATTAGAGTTGGAATTCGAGGCGAGGTCATCAAAGGATGGAGCATGGTATGATGTTGAGAAGTTTCTTTCCCACAGATTTCTCAGCACAGGTGAAGCTGAAGTCCGCGTCAGATTTATTGGATTTGGAGCTGAGGAAGATGAGTGGGTCAATATAAAAAATGCAGTGAGAGAACGCTCAGTGCCTTTAGAAAATACTGAATGTTCCAATCTAAAAGTTGGAGACCCGGTGTTGTGCTTCCAGGAGAGGAGAGATCAAGCAATTTATTATGATGCCCATATTTTAGAGATCCAAAGGAAAATGCATGATATCAGAGGCTGCAGGTGTCTCTTCTTGATTCAGTATGATCATGACAGTGGTGAGGATAAAGTTCGCCTGAGGAGACTTTGCCGCAGACCAAGATCCTAG 702 0.4416 MDRLRPRNRPVFFGFTNAEIEKMEKVLKDSGEESLGKEFCQRLTKSFNRSSGRAGKPVIKWTEIQSWFQTRLRESPEVPKNELILIKGVESKEGVIRDPLELEFEARSSKDGAWYDVEKFLSHRFLSTGEAEVRVRFIGFGAEEDEWVNIKNAVRERSVPLENTECSNLKVGDPVLCFQERRDQAIYYDAHILEIQRKMHDIRGCRCLFLIQYDHDSGEDKVRLRRLCRRPRS 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0504 233 Gene3D - 161 233 - -
Lele01g0504 233 SUPERFAMILY Chromo domain-like 111 153 IPR016197 -
Lele01g0504 233 Gene3D - 100 160 - -
Lele01g0504 233 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 11 232 IPR039276 -
Lele01g0504 233 Pfam SAWADEE domain 101 228 IPR032001 GO:0003682
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0504 Lele-ChrLele01 2987533 2990606 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0504 01 2987533 2990606 Lele01g0504 01 2987533 2990606 ECH
Lele01g0504 01 2987533 2990606 Lele02g0491 02 2948152 2949770 ECH
Lele01g0504 01 2987533 2990606 Lele03g0513 03 3009710 3012720 hybridization
Lele01g0504 01 2987533 2990606 Lele04g0510 04 3071328 3073701 hybridization