Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0492 ATGTGTAATTCCAAGTCATCTTTCTCAGCATCCCCATTTCTTTGTCCCACAAAAACTCATCTTGCAGCTCCCCAGAAACTCACGGATCCTTCCTCTGATCATGATGATGATCTTCACAGATGGCCAACTCCGAAAGAGGTCTTATCAGAAATCAAAGACATAAGCAAGATATCTGGCCCAACCGCCATCACCGGTTTACTCCTGTACTCGAGAGCTATGATATCTATGATCTTTCTTGGCTATCTCGGCGAGATGGAACTCGCAGGAGGCTCCCTTTCCATCGGCTTCGCCAACATCACCGGTTACTCTGTCATCTCTGGTTTAGCCATGGGGATGGAACCTATCTGCGGCCAAGCTTACGGAGCCAAACAATGGAAGCTTCTGGGATTAACACTACAAAGAACAATCCTTCTCCTTCTATCCAGTTCCATCCCCATCTCCTTCATGTGGCTCAACATGGAGACCATCCTCAATTGGTGCGGTCAAGACCAGGAGATTTCATCAATGGCTCAAACCTTCACTCTTTTTTCCATCCCAGACCTCTTCTTCCTCTCACTTCTTCACCCTCTTCGAATCTACCTCAGGACTCAAGGCGTCACATTGCCATTAACATATTGCACTGCGGTCTCTGTTCTCTTGCACGTTCCTCTGAGTTTCCTTTTGGTGGTTCATTTCAAGCAGGGAATAGCAGGGGTGGCTATAGCAATGGTTTTGACCAATCTCAACCTGTTCCTCTTCCTTTCCTCGTTTGTTTACTTCTCCGGTGTTTACAGAGATTCTTGGGTTTCCCCAAGCATGGACTGTCTAAAGGAATGGGCGTCTCTGCTTTCACTTGCGGTTCCAACATGTGTCTCTGTTTGTTTGGAGTGGTGGTGGTACGAGTTCATGATAATGCTGTGTGGACTTCTGGTGAATCCGAAAGCGACTATTGCTTCCATGGGAATCCTTATCCAAACAACCTCTTTGGTCTACGTCTTCCCTTCATCTCTGAGCCTCGGCGTCTCCACAAGAGTGGGTAACGAACTGGGCGCGAATCGACCGGCAAAAGCCCGCATTTCCATGATTGTGTCTCTGTTCTGCGCGGGGGGCCTAGGCCTGGCGGCCATGCTTTTCACCACCTTAATGAGGCATCAATGGGGTCGATTCTTCACCTCCGACGAGGAGATTCTGAAGCTTACCGCCATAGCATTGCCGATTGCCGGAATGTGCGAGCTCGGGAACTGCCCACAGACGACGGGTTGTGGGGTCCTGAGAGGAAGCGCAAGGCCCACCGTCGGAGCTAACATCAACCTGGGTTCCTTCTACCTTGTGGGTATGCCGGTGGCCATGCTTCTGGGATTTGTGCTCAAAATGGGATTTGCAGGGCTGTGGTTGGGGTTGCTTGGGGCCCAAGCCTCCTGTGCTGCACTTATGATGTTCGTCCTCTTAAGAACAGACTGGAATGAGCAAGTTCGAAGAGCGAGAGACCTCACCACAACCCCGTCCTCTGCTGCCGATCACTCTGCAATTCCGACATTCGCAAAAACTCAGACTAACAGCGACTCTTGTTATCTTCAAGAGATAGTGATCGGTGACGATAAGCGAAGCAAGTCAGCGTCGCTTGAGACAGACCCGTTGATATTAGCCAGCGCTGATCAGAGTGTGAATTGA 1650 0.5 MCNSKSSFSASPFLCPTKTHLAAPQKLTDPSSDHDDDLHRWPTPKEVLSEIKDISKISGPTAITGLLLYSRAMISMIFLGYLGEMELAGGSLSIGFANITGYSVISGLAMGMEPICGQAYGAKQWKLLGLTLQRTILLLLSSSIPISFMWLNMETILNWCGQDQEISSMAQTFTLFSIPDLFFLSLLHPLRIYLRTQGVTLPLTYCTAVSVLLHVPLSFLLVVHFKQGIAGVAIAMVLTNLNLFLFLSSFVYFSGVYRDSWVSPSMDCLKEWASLLSLAVPTCVSVCLEWWWYEFMIMLCGLLVNPKATIASMGILIQTTSLVYVFPSSLSLGVSTRVGNELGANRPAKARISMIVSLFCAGGLGLAAMLFTTLMRHQWGRFFTSDEEILKLTAIALPIAGMCELGNCPQTTGCGVLRGSARPTVGANINLGSFYLVGMPVAMLLGFVLKMGFAGLWLGLLGAQASCAALMMFVLLRTDWNEQVRRARDLTTTPSSAADHSAIPTFAKTQTNSDSCYLQEIVIGDDKRSKSASLETDPLILASADQSVN 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0492 549 PANTHER MULTIDRUG RESISTANCE PROTEIN 45 480 - -
Lele03g0492 549 TIGRFAM matE: MATE efflux family protein 66 457 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lele03g0492 549 Pfam MatE 281 443 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lele03g0492 549 Pfam MatE 60 220 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lele03g0492 549 CDD MATE_eukaryotic 50 486 IPR045069 GO:0042910|GO:1990961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0492 Lele-ChrLele03 2882071 2883876 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0492 03 2882071 2883876 Lele03g0492 03 2882071 2883876 ECH
Lele01g0484 01 2868759 2869952 Lele03g0492 03 2882071 2883876 hybridization
Lele02g0469 02 2829071 2832485 Lele03g0492 03 2882071 2883876 hybridization