Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0484 ATGGAGACCATCCTCAATTGGTGCGGTCAAGACCAGGAGATTTCATCAATGGCTCAAACCTTCATTCTTTTTTCCATCCCAGACCTCTTCTTCCTCTCACTTCTTCAGCCTCTTCGAATCTACCTCAGGACTCAAGGCGTCACATTGCCATTAACATATTGCACTGCAGTCTCTGTTCTCTTGCACGTTCCTCTGAATTTCTTTTTGGTGGTTCATTTCAAGCAGGGAATAGCAGGGGTGGCTATAGCAATGGTTTTGACCAATCTCAACCTGTTCCTCTTCCTTTCCTCGTTTGTTTACTTCTCCGGTGTTTACAGAGATTCTTGGGTTTCCCCAAGCATGGACTGTCTCAAGGGATGGGCGTCTCTGCTTTCACTTGCGGTTCCAACATGTGTCTCTGTTTGTTTGGAGTGGTGGTGGTACGAGTTCATGATAATGCTGTGTGGACTTCTGGTGAATCCGAAAGCGACCATTGCTTCCATGGGAATCCTTATCCAAACAACCTCTTTGGTCTACGTCTTCCCTTCATCTCTGAGCCTCGGCGTCTCCACTAGAGTGGGTAACGAACTGGGCGCGAATCGACCGGCAAAAGCCCGCATTTCCATGATTGTGTCTCTGTTCTGCGCGGTGGGCCTAGGCCTGGCGGCCATGCTTTTCACCACCTTAATGAGGCATCAATGGGGTCGATTCTTCACCACCGACGAGGAGATTCTGAAGCTTACCGCCATAGCATTGCCGATTGCCGGAATGTGCGAGCTCGGGAACTGCCCGCAGACGACAGGTTGTGGGGTCCTGAGAGGAAGCGCAAGGCCCACCGTCGGAGCTAACATCAACCTGGGTTCCTTCTACCTTGTGGGTATGCCGATGGCCATGCTTCTGGGATTTGTGCTCAAAATGGGATTTGCAGGGCTGTGGTTGGGGTTGCTTGCGGCCCAAGCCTCCTGTGCTGCACTTATGATGTTCGTCCTCTCAGGAACAGACTGGAATGAGCAAGTTCGAAGAGCGAGAGACCTCACCACAACCCCATCCTATGCTTCCGATCACTCTGCAATTCCAACATTCGCAAAAACTCAGACTAACAGCGACTCTTGTTATCTTCAAGAGATAGTGATCGGTGACGATGAGCGGAGCACGTCAGCGTCGCTTGAGACAGACCCGTTGATATTAGCCAGCGCTGATCAGAGTGTGAATTGA 1194 0.5084 METILNWCGQDQEISSMAQTFILFSIPDLFFLSLLQPLRIYLRTQGVTLPLTYCTAVSVLLHVPLNFFLVVHFKQGIAGVAIAMVLTNLNLFLFLSSFVYFSGVYRDSWVSPSMDCLKGWASLLSLAVPTCVSVCLEWWWYEFMIMLCGLLVNPKATIASMGILIQTTSLVYVFPSSLSLGVSTRVGNELGANRPAKARISMIVSLFCAVGLGLAAMLFTTLMRHQWGRFFTTDEEILKLTAIALPIAGMCELGNCPQTTGCGVLRGSARPTVGANINLGSFYLVGMPMAMLLGFVLKMGFAGLWLGLLAAQASCAALMMFVLSGTDWNEQVRRARDLTTTPSYASDHSAIPTFAKTQTNSDSCYLQEIVIGDDERSTSASLETDPLILASADQSVN 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0484 397 Pfam MatE 129 291 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lele01g0484 397 Pfam MatE 2 67 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lele01g0484 397 CDD MATE_eukaryotic 1 334 IPR045069 GO:0042910|GO:1990961
Lele01g0484 397 PANTHER MULTIDRUG RESISTANCE PROTEIN 1 328 - -
Lele01g0484 397 TIGRFAM matE: MATE efflux family protein 3 305 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0484 Lele-ChrLele01 2868759 2869952 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0484 01 2868759 2869952 Lele01g0484 01 2868759 2869952 ECH
Lele01g0484 01 2868759 2869952 Lele03g0492 03 2882071 2883876 hybridization
Lele01g0484 01 2868759 2869952 Lele04g0490 04 2952112 2956625 hybridization