Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0232 ATGTTTATCAGTAACAAATGTGTTTTCTCTTTTGTATTTCACGAGGGCACATTGGTCAATTCACCTTATTTTGAGAATGACAGAATACGTCCTCACGCTGTATTTACCAATCTCTCTCTCCTGCTGTCATTACTACCTTGGAAGAGCTGCCGCACGCCAATGGTTCGAGAAAAAGATGTCTGTTGGGAATATGCTGATAAATTAGATGGAAACAAGGTAAGATGCAAATTTTGCCAAAGAGTTTTAAACGGAGGCATCAGTAGATTGAAGAACCATCTATCTCGACTTCCAAGTAAAGGAGTAAATCCTTGTAGCAAGGTCAGAGATGATGTTACTGATAGGGTAAGGGCAGTTATTGCATCAAAGGAAGATGTCAAAGAAAACCCTAGCGTGAAAAGGCAGAAGCCACCAGAAGTCGAGTCTCCAAGTCCTGTTTCTGCAACTAAAACTCTTCTATCTATAGATGCAGCATCTCCTGTTACGAAGGGCTTCCTTGCAGTCAGTCCTATGACTCCGCCCTCTGTGAACCTCCAAGAGAATGCAGAGAAAAGCATTGCTCTCTTCTTTTTTGAGAATAAGCTAGACTTCAGTGTTGCACGGTCTTCATCCTATCAACTAATGATTGAAGCCATAGGGAAGTGTGGACCTGGATTTATTGGTCCATCAGCAGAGATGCTGAAGACAACATGGTTGGAAAGGATAAAGTCAGAAGTTGGCTTACTGTCGAAAGATGTTGAGAAAGAGTGGGCTACGACAGATTGGGTAAGCAGATGCGTTTTACAAGCACAGACCATATCAAAGTTTATATACAATAATGCATTGTTGCTTGATCTCATGAAGAAGTTAACTGGGGGCCAGGAACTAATCAGGACTGGCATCACAAAATCAGTATCCACCTTCCTGTCATTACAGTCTATGCTGAAGCAAAAACCAAGATTGAAGCATATGTTCCACAGCCCTGAATACGCTTCGAACACCTGGTATGCAAATAAACCACAAAGTCTTTCTTGTATTGCAATTGCTGAAGATCTTGATTTCTGGAGGACAGTGGAAGAGTGTGTGGCTATCTCTGAGCCTTTTCTGAAAGTGTTGAGAGAAGTTTCTGAAGGAAAACCAACTGTAGAAGACTTTTACAAGGTTTTGGAGAAACTACTTCCTGTACCTGACATGAGGCGTGATATCACCAACCAAATCTATACCTTTACAAAGGCCCATGGGATGTTTGATTGTAGCCTAGCAAAGGAGGCAAGAACTACAGTTTCACCATAGTGGGTAGAGGAGAGTGAAAATACAAGTCCAACTCAGTGGCTCGATCGTTTTGGCCCTGCCTTGGATGCGAGTGATCTGAATACCAGACAGTTCAGTTCTGCTATTTTTGGCGCAAATGATCCCATATTTGGATTAAAAATTTTGACTGAAGCTGAGAAGGAAAACCCAAACTGGAGCAGTTTTGAGGTTGAAAATCTTCCAACTAAAGGTGCTGAATCAGCATCACCAGTGATTCCTGGTTCAAATCCCATCGTGAGCAAATATATTTCCTTGGCGCTTAGCCGAGAAGCTGTCCCCATTGCTGTTTCAAATTATGGTGATAATCCAACCAAGGTTCGGGAATTTGTGAATGGCTACACCATCCTGCGTGAAATGGGTTTTCATCTAGCGAGGTTGCTGATGCCTTGGTTATGCATGAAAATAATACGGACAAGGCCCTGTAATATTTACTTGGTGGTTCATCGTGATAATCCTGAAAGATATTTGTTGTAG 1761 0.4202 MFISNKCVFSFVFHEGTLVNSPYFENDRIRPHAVFTNLSLLLSLLPWKSCRTPMVREKDVCWEYADKLDGNKVRCKFCQRVLNGGISRLKNHLSRLPSKGVNPCSKVRDDVTDRVRAVIASKEDVKENPSVKRQKPPEVESPSPVSATKTLLSIDAASPVTKGFLAVSPMTPPSVNLQENAEKSIALFFFENKLDFSVARSSSYQLMIEAIGKCGPGFIGPSAEMLKTTWLERIKSEVGLLSKDVEKEWATTDWVSRCVLQAQTISKFIYNNALLLDLMKKLTGGQELIRTGITKSVSTFLSLQSMLKQKPRLKHMFHSPEYASNTWYANKPQSLSCIAIAEDLDFWRTVEECVAISEPFLKVLREVSEGKPTVEDFYKVLEKLLPVPDMRRDITNQIYTFTKAHGMFDCSLAKEARTTVSPXWVEESENTSPTQWLDRFGPALDASDLNTRQFSSAIFGANDPIFGLKILTEAEKENPNWSSFEVENLPTKGAESASPVIPGSNPIVSKYISLALSREAVPIAVSNYGDNPTKVREFVNGYTILREMGFHLARLLMPWLCMKIIRTRPCNIYLVVHRDNPERYLL 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0232 586 SUPERFAMILY Ribonuclease H-like 252 399 IPR012337 -
Lele03g0232 586 MobiDBLite consensus disorder prediction 125 145 - -
Lele03g0232 586 Pfam BED zinc finger 60 95 IPR003656 GO:0003677
Lele03g0232 586 PANTHER OSJNBA0013A04.12 PROTEIN 67 435 - -
Lele03g0232 586 ProSiteProfiles Zinc finger BED-type profile. 56 111 IPR003656 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0232 Lele-ChrLele03 1265724 1272339 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0232 03 1265724 1272339 Lele03g0232 03 1265724 1272339 ECH
Lele02g0221 02 1239636 1249545 Lele03g0232 03 1265724 1272339 hybridization