Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0221 ATGGATCAAAGAGATAGGGGTCCATCTGGTTTGGAGAGGATAGCAATCATGGAGTATATTGGTCTAGACCGATTGGTAGTGATAGAAGATGAGTTTGGGAAAACTAAAGGAAGCGCAGATTGCGGAATGCGACAGAATGAGGAGCGAGCTCGTGAGCTTTGTCTGCTTCGTTTATGCGAGGCCACTGCAACAGTTACAGACACAAATGCATTGACTTTGAATTCGGCCACCGAAAGGAAGGGTTCAATCTCCGTCATAGAGTACATGCACTGCCGTGAAACAAGTGAAACACAAAGAATGACCAATCTCTCTCCCCTGCTGTCATTACTACCTTGGAAGAGCTGCCACAAGCCAATGGTTCGAGAAAAAGATGTCTGTTGGGAATATGCAGATAAATTAGATGGAAACAAGGTAAGATGCAAATTTTGCCAAAGGGTTTTAAATGGAGGCATCAGTAGATTGAAGCACCATCTATCTCGACTTCCAAGTAAAGGAGTAAATCCTTGTAGCAAGGTCAGAGATGATGTTACTGATAGGGTAAGGGCAATTATTGCATCAAAGGAAGATGTCAAAGAAAACTCTAGTGTGAAAAGGCAGAAGCTACCAGAAGTCAAGTGTCCAAGTCCTGTTTCTGCAACTAAAACTCTTCTATCTATAGATGCAGCATCTCCTGTTATGAAGGGCTTCCTTACAGTCAGTCCTATGACTCCGCCCTCTGTAAACCTCCAAGAGAATGCAGAGAAAAGCATTGCTCTCTTCTTTTTTGAGAATAAGCTAGACTTCAGTGTTGCACGGTCTTCATCCTATCAACTAATGATTGAAGCCATAGGGAAGTGTGGTCCTGGATTTATTGGTCCATCAGCAGAGATGCTGAAGACATCATGGTTGGAAAGGATAAAGTCAGAAGTTGGCTTACAGTCCAAAGATGTTGAGAAAGAGTGGGTTACCACAGATTGGGTAAGCAGATGCGTTTTACAAGCACAGACCATATCAAAGTTCATATACAATAATGCATTGCTGCTTGATCTCATGAAGAAGTTCACTGGGGGCCAGGAACTAATCAGGACCAGCACCAGAAAATCAGTATCCACCTTCCTGTCATTACAGTCTATGCTGAGGCAGAAATCAAGATTGAAGCATATGTTCCGCAGCCCTGAATACGCTTCAAACACCTCATATGCAAATAAACCACAAAGTCTATCTTGCATTGCAATTGCTGAAGATCTTGATTTCTGGAGGACAGTGGAAGAGTGTGTGGCTATCTCTGAGCCTTTTCTGAAAGTGTTGAGAGAAGTTTCCGAAGGAAAACCAACTGACTTTTACAAGGTTTTGGAGAAACTACTTCCTATACCTGACATGAGGCGTGATATCACCAATCAAATCTATACCTTTACAAAGGCCCATGGGATGTTTGATTGTAGCCTAGCTAAGGAGGCAAGAACTACAGTTTCACCATGGCTTTGGTGGGAGCAATATGGTGACTCTGCCCCTGGATTGCAACGAGTGGCCATTAGAATATTAAGTCAAGTCTGTAGCACATTCTCTTTTCAGCGGCACTGGAGTACATTCCAGCAAATTCACTCTGAGAAACGAAATAAGATAGATAGAGAAACGTTGAATGACGTTATCTATATAAATTACAATCTCAAGTTGGCCAGACAAATGAAAGGCAAGTCTTCAGAAGCTGATCCGCTTCAATTTGATGATATTGATATGACTTCAGAGTGGGTAGAGGAGAGCGAAAATACAAGTCCAACTCAGTGGCTCGATCGTTTTGGCCCTGCCTTGGATGCCAGTGATCTGAATACCAGACAGTTCAGTTCTGCTATTTTTGGCGCAAATGATCCCATATTCGGATTTCCTAGCCATGAAACCGCGAAATTCTTAAATATTCAGTTATTCCTGCGAATAACTGAATGTGTTGCCGACGTGGCATCCCTTGGTTACCCGCCTCCACTTATCGGAGATCTTGGCGTTTGTTTACAAGTCATGGACTCCGACTTCCGACTTCAGGAGCAGGCTCGGTCCACCGCTGTACAACGGACAATTCCCGATGTACCGTTCCGCAGCATCCCCGTCACCGGGTATCTACCAGATGCCCGTTCCGCCCGTGTACCCAAAGATCTTCCATGTAGTAACTTCCAATTTGATTTTGTATTAGAAAGAAAAACTTTGTCTGAAGCTGAGAAGGGAAGCCCAAACTCGAGCAGTTTTGGGGTTGAAAGTCTTCCAGCTAAAGGTGTTCAATCAGCATCACCAGTGATTCCTGGTTCAAATCCCATTGTGAGCAAATATATTGCCTTGGTGCTTAGCCGAGAAGCTGTCCCCATTGCTGTTTCAAATTATGGTGTTAGGAAATTTGTGAATGGCTGCACCATTCTGCGTGAAATGGGGTTTTCAGCTGGCGCTGTTGCTAATGCCTTGGTTATGCACGAAAATAATACGAACAAGGCCCCGGCACATTTCCTGGGTGGTTCATCGTGA 2484 0.4392 MDQRDRGPSGLERIAIMEYIGLDRLVVIEDEFGKTKGSADCGMRQNEERARELCLLRLCEATATVTDTNALTLNSATERKGSISVIEYMHCRETSETQRMTNLSPLLSLLPWKSCHKPMVREKDVCWEYADKLDGNKVRCKFCQRVLNGGISRLKHHLSRLPSKGVNPCSKVRDDVTDRVRAIIASKEDVKENSSVKRQKLPEVKCPSPVSATKTLLSIDAASPVMKGFLTVSPMTPPSVNLQENAEKSIALFFFENKLDFSVARSSSYQLMIEAIGKCGPGFIGPSAEMLKTSWLERIKSEVGLQSKDVEKEWVTTDWVSRCVLQAQTISKFIYNNALLLDLMKKFTGGQELIRTSTRKSVSTFLSLQSMLRQKSRLKHMFRSPEYASNTSYANKPQSLSCIAIAEDLDFWRTVEECVAISEPFLKVLREVSEGKPTDFYKVLEKLLPIPDMRRDITNQIYTFTKAHGMFDCSLAKEARTTVSPWLWWEQYGDSAPGLQRVAIRILSQVCSTFSFQRHWSTFQQIHSEKRNKIDRETLNDVIYINYNLKLARQMKGKSSEADPLQFDDIDMTSEWVEESENTSPTQWLDRFGPALDASDLNTRQFSSAIFGANDPIFGFPSHETAKFLNIQLFLRITECVADVASLGYPPPLIGDLGVCLQVMDSDFRLQEQARSTAVQRTIPDVPFRSIPVTGYLPDARSARVPKDLPCSNFQFDFVLERKTLSEAEKGSPNSSSFGVESLPAKGVQSASPVIPGSNPIVSKYIALVLSREAVPIAVSNYGVRKFVNGCTILREMGFSAGAVANALVMHENNTNKAPAHFLGGSS 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0221 827 Coils Coil 827 827 - -
Lele02g0221 827 Pfam BED zinc finger 125 160 IPR003656 GO:0003677
Lele02g0221 827 SUPERFAMILY Ribonuclease H-like 319 552 IPR012337 -
Lele02g0221 827 ProSiteProfiles Zinc finger BED-type profile. 121 176 IPR003656 GO:0003677
Lele02g0221 827 Pfam hAT family C-terminal dimerisation region 481 549 IPR008906 GO:0046983
Lele02g0221 827 PANTHER OSJNBA0013A04.12 PROTEIN 131 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0221 Lele-ChrLele02 1239636 1249545 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0221 02 1239636 1249545 Lele02g0221 02 1239636 1249545 ECH
Lele02g0221 02 1239636 1249545 Lele03g0232 03 1265724 1272339 hybridization
Lele02g0221 02 1239636 1249545 Lele04g0225 04 1341921 1344543 hybridization