Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0220 ATGGCACAGACCCTTCGCATGGCCGTCGCAGTTCTTGGGAATGCTGCCTCAGTTTCCCTTTACGCTGCTCCCACGCTTACCTTTAGGAGGGTCATAAGGAAGAAAAGCACAGAGGAGTTCTCGTGCATTCCCTACATCATCGGACTGTTGAACTGCCTCCTTTTTACTTGGTATGGATTGCCTGTTGTGAGCTGCAAATGGGAAAATTTCCCTCTGGTTACAGTCAATGCCGTCGGGGTCGCCCTTGAGCTATCTTATGTTCTCATTTACTTCTGGTATGCTTCCGCCAAAGGAAAGGTACAGGTAGCCATGACAGCTATACCAGTTTTGCTAGTGTTCTGCATCACTGCTGTTATCTCAGCTTTTGCCTTCCATGACCACCGGCATCGAAAGCTACTCGTGGGAAGCATAGGCCTTGTGGTCGCAATAGCATTGTACGGCTCTCCTTTGGTCGTGATGAAGAAAGTTATAAAGGCAAAGAGTGTGGAATTCATGCCACTTCCCTTATCGTTGTTCTCATTCCTAGCTAGTTCGCTCTGGTTGACTTACGGACTCCTCATCCGTGACATTTTTGTAGCGGGACCGAGTGTGATTGGGGTTCCATTAGGAATCCTGCAGCTGGTGCTTCACTGCAAATACTGGAAAGGAAAGGTAATGGAGGAACCAGTGAAGGACGATGTAGAGAAGGGGAACCTTGAGAAAGAGGGATTGGAAGTGGAAATGGGGAGCACAGAAAAGAAGGACTTGGAGAAGAATGTGACAAAATCATAG 771 0.4799 MAQTLRMAVAVLGNAASVSLYAAPTLTFRRVIRKKSTEEFSCIPYIIGLLNCLLFTWYGLPVVSCKWENFPLVTVNAVGVALELSYVLIYFWYASAKGKVQVAMTAIPVLLVFCITAVISAFAFHDHRHRKLLVGSIGLVVAIALYGSPLVVMKKVIKAKSVEFMPLPLSLFSFLASSLWLTYGLLIRDIFVAGPSVIGVPLGILQLVLHCKYWKGKVMEEPVKDDVEKGNLEKEGLEVEMGSTEKKDLEKNVTKS 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0220 256 PANTHER RAG1-ACTIVATING PROTEIN 1 17 228 - -
Lele03g0220 256 FunFam Bidirectional sugar transporter SWEET 130 222 - -
Lele03g0220 256 FunFam Bidirectional sugar transporter SWEET 7 99 - -
Lele03g0220 256 Pfam Sugar efflux transporter for intercellular exchange 133 215 IPR004316 GO:0016020
Lele03g0220 256 Pfam Sugar efflux transporter for intercellular exchange 9 97 IPR004316 GO:0016020
Lele03g0220 256 Gene3D - 132 225 - -
Lele03g0220 256 MobiDBLite consensus disorder prediction 229 256 - -
Lele03g0220 256 Gene3D - 10 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0220 Lele-ChrLele03 1188608 1190321 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0220 1 233 Miscellaneous Gene Families AT5G53190 56.017 4.71e-99 288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0214 01 1213184 1220276 Lele03g0220 03 1188608 1190321 hybridization
Lele02g0212 02 1165012 1166785 Lele03g0220 03 1188608 1190321 hybridization