Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0214 ATGCAACTCAATCTTCGCGTGCCGTTCTTTCTTCCTCTGTTACATTTGCGCCAACCTGTTGGTGAAATCCCATTAAGCATCGGCCACGCAGAACCAGACATGGAAAAAGCATCAGAAACCTCTTGCTGGGTTCTAGGATTTGAGGATATTGAACTTCCAGTGCACATTCTTCGCCTCATCATCTGTACTAGAGACTTAAAGAGAGAACTAAAGATGGCACAGACCCTTCGCATGGCCGTCGCAGTTCTTGGGAATGCTGCCTCAGTTTCCCTTTACGCTGCTCCCACAATTACCTTTAGGAGGGTCATAAGGAAGAAAAGCACAGAGGAGTTCTCGTGCATTCCTTACATCATTGGACTGTTGAACTGTCTCCTTTTTACTTGGTATGGATTGCCTGTTGTAAGCTGCAAATGGGAAAATTTCCCTCTGGTTACAGTCAATGCTGTCGGGGTCACCCTTGAGCTATCTTATGTTCTCATTTACTTCTGGTATGCTTCCGCCAAAGGAAAGGTACAGGTAGCCATGACAGCTATACCAGTTTTGCTAGTGTTCTGCATCACTGCTGTTATCTCAGCTTTTGCCTTCCATGACCACCGGCATCGAAAGCTACTCGTGGGAAGCATAGGCCTTGTGGTCGCAATAGCATTGTACGGCTCTCCTTTGGTCGTGATGAAGAAAGTTATAAAGACAAAGAGTGTGGAATTCATGCCACTTCCCTTATCGGTGTTCTCATTCCTAGCTAGTTCGCTCTGGTTGACTTACGGGCTCCTCATCCGTGACATTTTTGTAGCGGGACCGAGTGTGATTGGGGTTCCATTAGGAATCCTGCAGCTGGTGCTTCACTGCAAATACTGGAAAGGAAAGGTTATGGAGGAACCAGTGAAGGAAGATGTAGAGAAGGGGAACCTTGAGAAAGAGGGATTGGAAGTGGAAATGGGGAACACAGAAAAGAAGGACTTGGAGAAGAATGTGACAAAATCATAG 984 0.4634 MQLNLRVPFFLPLLHLRQPVGEIPLSIGHAEPDMEKASETSCWVLGFEDIELPVHILRLIICTRDLKRELKMAQTLRMAVAVLGNAASVSLYAAPTITFRRVIRKKSTEEFSCIPYIIGLLNCLLFTWYGLPVVSCKWENFPLVTVNAVGVTLELSYVLIYFWYASAKGKVQVAMTAIPVLLVFCITAVISAFAFHDHRHRKLLVGSIGLVVAIALYGSPLVVMKKVIKTKSVEFMPLPLSVFSFLASSLWLTYGLLIRDIFVAGPSVIGVPLGILQLVLHCKYWKGKVMEEPVKEDVEKGNLEKEGLEVEMGNTEKKDLEKNVTKS 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0214 327 PANTHER RAG1-ACTIVATING PROTEIN 1 88 299 - -
Lele01g0214 327 MobiDBLite consensus disorder prediction 296 327 - -
Lele01g0214 327 Gene3D - 203 296 - -
Lele01g0214 327 Pfam Sugar efflux transporter for intercellular exchange 204 286 IPR004316 GO:0016020
Lele01g0214 327 Pfam Sugar efflux transporter for intercellular exchange 80 168 IPR004316 GO:0016020
Lele01g0214 327 FunFam Bidirectional sugar transporter SWEET 78 170 - -
Lele01g0214 327 FunFam Bidirectional sugar transporter SWEET 201 293 - -
Lele01g0214 327 Gene3D - 81 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0214 Lele-ChrLele01 1213184 1220276 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0214 72 304 Miscellaneous Gene Families AT5G53190 56.017 7.43e-98 288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0214 01 1213184 1220276 Lele03g0220 03 1188608 1190321 hybridization
Lele01g0214 01 1213184 1220276 Lele04g0214 04 1264829 1266585 hybridization