Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0361 ATGCACTGGAGACAGCCAATTATGAAAAGCTTCTTCAATCTGGATTACAGGCATGATCTGGAAGACAGCTTTGTAACTAATATAGCAATTGTTGGTCGTCCAAATGTTGGCAAGTCAAGCCTTCTTAATGCATGGAGCAAAAGTGAGAGGGCTATAGTTACTGAAATTGCTGGAACCACCCGGGATGTGATTGAAGCTAGTGTCACCATTAATGGTATTCCTATAACCTTGCTTGATACTGCAGGAATCAGGGATACTGATGACATTGTTGAAAAGATTGGCGTAGAGAGATCTGAAGCAGTTGCTATGAGAGCTGACTTGATTATCATGACTGTCAGTGCTGTTGAAGGGTGGACTTTGGAAGACGCCAAACTTCTAGAAAGGATTCAATCTAATAAGAGATCAATGGGATTTTCCACCCCTGCAATTCTTGTGGTCAACAAGATAGATTGTGCTCCTGGTGCTGAGAATGGATGGGCCGAAGTATGCTCCAATTTTGTCAGTAAACATGTGTTTACATGTGCTGTCACTGGCGAAGGATTACAGGAGTTAGAGAGGGTTGTGTTAGAGATAGTGGGTCTGAACAGCATTCCCACCGGGGGACGTAAATGGACGGTTAATCAGAGACAATGTGAACAACTTGTTCGGACGAAGGAAGCTTTAGAAAGACTAAAAGCCTCAATAGAGGAGAAACTTCCTCTGGATTTTTGGACAATTGATTTAAGGGATGCAGCATTGGCGCTTGGGCAGATCAGTGGAGAAGATATATCAGAAGAGGTTTTATCTAATATATTTGGCAAGTTCTGTATTGGTAAATAG 819 0.4225 MHWRQPIMKSFFNLDYRHDLEDSFVTNIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASVTINGIPITLLDTAGIRDTDDIVEKIGVERSEAVAMRADLIIMTVSAVEGWTLEDAKLLERIQSNKRSMGFSTPAILVVNKIDCAPGAENGWAEVCSNFVSKHVFTCAVTGEGLQELERVVLEIVGLNSIPTGGRKWTVNQRQCEQLVRTKEALERLKASIEEKLPLDFWTIDLRDAALALGQISGEDISEEVLSNIFGKFCIGK 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0361 272 Pfam MnmE helical domain 166 269 IPR025867 -
Lele02g0361 272 Gene3D tRNA modification GTPase MnmE domain 2 168 272 IPR027368 -
Lele02g0361 272 CDD trmE 27 193 IPR031168 -
Lele02g0361 272 PANTHER TRNA MODIFICATION GTPASE GTPBP3 27 272 - -
Lele02g0361 272 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 27 191 IPR027417 -
Lele02g0361 272 SUPERFAMILY TrmE connector domain 50 272 - -
Lele02g0361 272 Pfam 50S ribosome-binding GTPase 27 148 IPR006073 GO:0005525
Lele02g0361 272 FunFam tRNA modification GTPase MnmE 26 200 - -
Lele02g0361 272 ProSiteProfiles TrmE-type guanine nucleotide-binding (G) domain profile. 25 193 IPR031168 -
Lele02g0361 272 TIGRFAM small_GTP: small GTP-binding protein domain 27 151 IPR005225 GO:0005525
Lele02g0361 272 Gene3D - 8 87 IPR027417 -
Lele02g0361 272 Coils Coil 207 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0361 Lele-ChrLele02 2090006 2097717 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0361 02 2090006 2097717 Lele02g0361 02 2090006 2097717 ECH
Lele02g0361 02 2090006 2097717 Lele03g0372 03 2133894 2134688 hybridization
Lele02g0361 02 2090006 2097717 Lele04g0369 04 2178255 2182153 hybridization