Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0275 ATGGAGTTACCGGAGTGCCCGGTGTGCCTCCAAACCTACAACGAAGAGAATACAATTCCAAAGGTTCTTGCCTGTGGCCACTCGGTTTGTGAAGCCTGCCTAGTTGAACTCCCACAGCGATACCCCACTACCACCATACGCTGCCCTGCGTGTACCCAACTCGTCAAGTATTCTGCTCAGCAAGGACCATCTTCCTTTCCCAAGAACATCGACCTCCTCAGACTCTGTCTCGAACCCCCATCTTCTTCTTCTTCCGATGTCTCACAGAATTCGAAGTATCATTCCGCCAATAATGGTGACGATCACTATGAATTTTATCCTCGGTTCTGGTCGGACGAGTTGAGAGTTTGCATAAAAGAAAACCAGAGCCTGAGCCTTGTCCCGATTGCTTCTTTACCTCCAGTCAATCATTCTAACTTAAAACTTAGTTATGAGGCTCGAATTATGATTTGTTTGGAGGGGATGAAAGAGGTTCAGAGGCATGAGTTAGCATTGTTTCTCAAAGCGTCCATAAAACAGGATAGGATATGTGATGCTTATGGCTTGTGGAGCGACTTAGTAGATGGTCAACTATATTGGTAG 582 0.4622 MELPECPVCLQTYNEENTIPKVLACGHSVCEACLVELPQRYPTTTIRCPACTQLVKYSAQQGPSSFPKNIDLLRLCLEPPSSSSSDVSQNSKYHSANNGDDHYEFYPRFWSDELRVCIKENQSLSLVPIASLPPVNHSNLKLSYEARIMICLEGMKEVQRHELALFLKASIKQDRICDAYGLWSDLVDGQLYW 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0275 193 SMART ring_2 6 51 IPR001841 -
Lele02g0275 193 ProSitePatterns Zinc finger RING-type signature. 25 34 IPR017907 -
Lele02g0275 193 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 85 IPR013083 -
Lele02g0275 193 SUPERFAMILY RING/U-box 5 59 - -
Lele02g0275 193 PANTHER PROTEIN CBG20824 1 110 - -
Lele02g0275 193 Pfam RING-type zinc-finger 6 49 IPR027370 -
Lele02g0275 193 ProSiteProfiles Zinc finger RING-type profile. 6 52 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0275 Lele-ChrLele02 1570532 1571245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0275 5 96 Miscellaneous Gene Families AT1G74370 31.731 4.20e-08 50.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0275 02 1570532 1571245 Lele02g0275 02 1570532 1571245 ECH
Lele02g0275 02 1570532 1571245 Lele04g0283 04 1670559 1671095 hybridization