Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0238 ATGCCTTGCTTCGGGCAGCTAGAGTCTAGTGTCTCTGGTTCCATGGGTTATGGAAAATACCGACAGTTGAGGAGGAAGAAAAGCTTGTGGAAGCTTTTCGGCAAAGAATTACAGCAGAAAGACAGAAATAGCATGGCTCTGGAGAACTGTTTACGAGTGAGCACAGTGGGTATGGCCAGACCTCAATGCATTCATCCATTTTCTTCTAGGGCAAAGATTGTTGTCCCCAATTCCAAAGGATTCAAATCAGCGGTATCAAACCCCTCTCTTAAATCAACCACTGGAAACTACCGAAGATCCCGTTTTATTTGCAAGGCTCGGGAAGCTGTTGACGAAGTTCGAGTAGTGACAGATTCAACCTGGAATAACCTGGTGATAGCGAGTGAAACGCCGGTGCTGGTGGAGTTTTGGGCGCCATGGTGTGGACCGTGCAGGATGATAGCTCCTGTGATTGATGAATTGGCGAAAGAGTATGCTGGCAAAATTGCATGCTTCAAGCTCAACACTGATGACAGTCCGAACATACCCACACAATACGGAATCAGGAGCATACCAACAGTTCTCTTCTTCAAGAATGGTGAGAAAAAAGAGAGCGTAATTGGTGCGGTCCCCAAGTCTACCCTGTCGGCAACGGTGGAGAAATATATAGATATCTGA 657 0.4658 MPCFGQLESSVSGSMGYGKYRQLRRKKSLWKLFGKELQQKDRNSMALENCLRVSTVGMARPQCIHPFSSRAKIVVPNSKGFKSAVSNPSLKSTTGNYRRSRFICKAREAVDEVRVVTDSTWNNLVIASETPVLVEFWAPWCGPCRMIAPVIDELAKEYAGKIACFKLNTDDSPNIPTQYGIRSIPTVLFFKNGEKKESVIGAVPKSTLSATVEKYIDI 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0238 218 CDD TRX_family 125 213 - -
Lele02g0238 218 Gene3D Glutaredoxin 113 217 - -
Lele02g0238 218 ProSiteProfiles Thioredoxin domain profile. 79 217 IPR013766 -
Lele02g0238 218 TIGRFAM thioredoxin: thioredoxin 117 215 IPR005746 GO:0015035
Lele02g0238 218 Pfam Thioredoxin 113 213 IPR013766 -
Lele02g0238 218 PRINTS Thioredoxin family signature 132 140 - -
Lele02g0238 218 PRINTS Thioredoxin family signature 140 149 - -
Lele02g0238 218 PRINTS Thioredoxin family signature 180 191 - -
Lele02g0238 218 SUPERFAMILY Thioredoxin-like 101 217 IPR036249 -
Lele02g0238 218 FunFam Thioredoxin 107 216 - -
Lele02g0238 218 ProSitePatterns Thioredoxin family active site. 133 151 IPR017937 -
Lele02g0238 218 PANTHER GEO12009P1 96 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0238 Lele-ChrLele02 1353070 1354098 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0238 02 1353070 1354098 Lele02g0238 02 1353070 1354098 ECH
Lele02g0238 02 1353070 1354098 Lele03g0253 03 1381239 1382005 hybridization
Lele02g0238 02 1353070 1354098 Lele04g0244 04 1450453 1451211 hybridization