Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0228 ATGGGGCTGATATCGGCGGTACGGGATTATATCAGCCGGATGTTGCTAGACATCTCTGGCATGAAGGTAAGTATTGTCAGTGTTGTCTATTCACAGTCAGAGCTTCTTCAGAAAGAAGTCTTTTTAGTAGAGTTGGTGGATTCCATTTCGAAGTCGAAGGAACCTATGTCACATCTCAAGGCGGTTTGCTTCCTTCGACCAACTTCAGAGAACATCCAGCATTTGCGCCGCCAGATAGCCAATCCTAGATTTGGAGAATATCATCTTTTTTTCTCCAATATGTTGAAGGACACTCAGATTCACATACTCGCTGATTCAGATGAACAGGAAGTTGTCCAGCAAGTTCAGGAGTTTTATGCAGACTTTGTTGCACTTGATCCTTACCATTTTACCTTAAATATGCCTTCAAATTACATTTATATGCTCCCAGCAGTGGTGGATCCTTTAACATTGCAGCGCTTCTGTGATCGGGCTGTTGACAGTATTGCAGCTGTTTTTTTGGCACTAAAGCGAAGACCCATTATTAGATACCAAAGGGCATCCGACGTAGCAAAAAGAATAGCACAGGAAGCAGCAGAAAGTGGTCTTTTTGATTTTAGGCGAACAGAAGTTTCTCCATTATTACTGGTGATTGATCGGAGGGATGATCCTGTAACCCCATTGTTAAATCAATGGACCTATCAGGCAATGGTTCATGAACTAATAGGAATCCAAGATAACAAAGTAGACTTTAAATCCCTTGGTAAATTTCCAAAGGACCAGGAGGAAGTTGTGCTGTCATCAGAACAAGATTCTTTCTTCAAAGCCAACATGTATGAGAATTTTGGAGATATAGGTATGAATATCAAGCGATTGGTGGATGAATTTCAGCAAGTGGCAAAGAGTAACCAGAACATCCAGACAATAGAGGACATGGCCAAATTCGTTGACAATTACCCTGAGTACAGAAAAATGCATGGAAATGTGTCCAAACATGTAACCTTGGTAACAGAAATGAACAAGATAGTTCATGAGAGAAAGCTTATGTTAGTTTCAGAAGTAGAACAGGAGTTGGCTTGTAATGGAGGACAAGGGGCTGCTTGTGAGGCAGTGACAAATCTACTAAACAATGAGAGTATATCAGATGAGGACCGGCTACGTTTAGTCATGTTGTATGCTTTGCGATATGAAAAGGATAGCCCTATTGTCCAGTTTCTTTTGAAGCAAGCAGGTGTTGACAAGAGAACTGGTGATCTTTATGGAAGTAGAGATCTACTGAATATTGCTCGTAATATGGCTCGTGGATTGAAGGGTGTGGAGAATGTATACACTCAACATCAGCCACTTCTGTTCCAGACCATGGAAGGCATTGTGAAAGGACGATTGAAGGATGTGGACTACCCAATTGTTGGAAATCACTTTCAGCAGGGAAGGCCACAGGAAGTTATCATCTTCATTGTTGGTGGGACGACTTATGAGGAGTCAAGATGTATTGCAATGCAAAATAACAATAATACTGGGATTCGTTTCATACTTTGTGCGACGTGGTTGGGAACTTGGGATTTGGTGATTTTTCTGTTGGTGAGTTACGCTTCAGTAGACGCTTTTAAAACAAAAGCCATGTCCTGTGACTGGAGTCTTCCAGTTCCTTGGGAATCATTCATGGTCTTCTCCTTGGTAGTAAAGTTTATTAGGGACTTGGAAGAAGCTCAGAGGGTAGCTCGTTCTAGCCCCTCTATCGTTTGA 1725 0.4174 MGLISAVRDYISRMLLDISGMKVSIVSVVYSQSELLQKEVFLVELVDSISKSKEPMSHLKAVCFLRPTSENIQHLRRQIANPRFGEYHLFFSNMLKDTQIHILADSDEQEVVQQVQEFYADFVALDPYHFTLNMPSNYIYMLPAVVDPLTLQRFCDRAVDSIAAVFLALKRRPIIRYQRASDVAKRIAQEAAESGLFDFRRTEVSPLLLVIDRRDDPVTPLLNQWTYQAMVHELIGIQDNKVDFKSLGKFPKDQEEVVLSSEQDSFFKANMYENFGDIGMNIKRLVDEFQQVAKSNQNIQTIEDMAKFVDNYPEYRKMHGNVSKHVTLVTEMNKIVHERKLMLVSEVEQELACNGGQGAACEAVTNLLNNESISDEDRLRLVMLYALRYEKDSPIVQFLLKQAGVDKRTGDLYGSRDLLNIARNMARGLKGVENVYTQHQPLLFQTMEGIVKGRLKDVDYPIVGNHFQQGRPQEVIIFIVGGTTYEESRCIAMQNNNNTGIRFILCATWLGTWDLVIFLLVSYASVDAFKTKAMSCDWSLPVPWESFMVFSLVVKFIRDLEEAQRVARSSPSIV 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0228 574 PIRSF VPS45_Sec1 391 514 IPR001619 GO:0016192
Lele02g0228 574 PIRSF VPS45_Sec1 3 395 IPR001619 GO:0016192
Lele02g0228 574 Gene3D Syntaxin Binding Protein 1; Chain A, domain 2 224 337 IPR043127 -
Lele02g0228 574 SUPERFAMILY Sec1/munc18-like (SM) proteins 1 510 IPR036045 -
Lele02g0228 574 Pfam Sec1 family 24 508 IPR001619 GO:0016192
Lele02g0228 574 Gene3D - 130 508 IPR027482 -
Lele02g0228 574 Gene3D - 5 120 IPR043154 -
Lele02g0228 574 PANTHER VESICLE PROTEIN SORTING-ASSOCIATED 23 510 IPR001619 GO:0016192
Lele02g0228 574 Gene3D - 339 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0228 Lele-ChrLele02 1287216 1292655 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0228 02 1287216 1292655 Lele02g0228 02 1287216 1292655 ECH
Lele02g0228 02 1287216 1292655 Lele03g0239 03 1309796 1314724 hybridization
Lele02g0228 02 1287216 1292655 Lele04g0234 04 1386000 1391052 hybridization