Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01891 ATGATGGATGCTTGCAACCTTTTACTAGCCAACGGACTTGAAGAGGTTCACCAAAATGGTGTTCATGGAAAACTGTCTAACTCAGGAAAGGATGGAATTGCTTCAAATGTAGACTCTGCTGTCACTCAAGTTACACAAGCTGAAGCTCCAAATGGAATTTTTGAAAACTTCATCCAGTATGATAGCATTGCAACTGATTACTCATCCAAGGCAGAAATCAAGGAAGGATCAAATGACTACATAGGTGTCAACAATTTCACCATTTCTAAGGAGGAGGAAGCAGAAATCATAGTCCAGACAGAGCAATTAAAAGCAGGAAAAGGTCCTGTCAAGAATAAGAATGCAAAGTCACCAAGCCCCAGAGGTGTTCATGCAAGTTTAATGAAAAAGAGCAAAGATGGAAAAGATGAAGTGGTAGCATCTACTGTTTCAAATGGCACTTTTGCTTCGGACTCTATCCCAAGACAGCATATTAAAAATTCATCATCGGTTGACAAGCAGGCTCGATTGTCGAAGCACCCTGGAAAGTCTAACGTGGCACCTTCTGAAGCATCAATGGAGAAGACCAGACCACGATTATCAAAGAAAGGCCCCCCTGATAATCTTAATCTTCAAGGAGAAGCAGAATCTTCATCTCCTACTGCAGAAGATGCCAAACCTCGCAGGGTAGGCATGCTCCCAAATTATGGATTCAGTTTCAAGTGTGATGAGCGAGCTGAGAGAAGAAGGGAGTTCTACACTAAACTTGAGGAAAAGATTCATGCAAAAGAAGTGGAGGAGAGTAACCTGCAAGCGAAAACCAAGGAGACCCAAGAAGCTGAGATTAAGATGCTTAGAAAAAGTCTAGGATTTAAAGCAACTCCGATGCCAAGCTTCTACCAGGAGCCTCCTCCTCCCAGGGTGGAAATTAAAAAGATGCCCACTACAAGAGCTAAATCTCCCAAGCTTGGTCGTAAGAAGAGTTCAACAGTTTCAGAGTCAGAAGGAAACACTAGCAATAGTGCTCGACCAGGTCGATTAAGTCTGGATGAGAAAGTGTCTCAGACTAACCTCACTAAAGGAATTACTCCTGTTCATCAAAAGAAGCCACAACGAAAGTCTCTTCCTCCTCGACTGACTTCTGAAAAGACCAGTTCATCCAATTCGGCATCTGTGCGGACCCCATCTAAGGCAGTTAATGATGACAAAACCTCCTTATCTAGTGTAACAACTGAAGTTACCAGCTTATCCATTTCAACTGGGGAAGAGAAAGTTGAAATAGCCGCAGCCACTGAAGAGAGCAAGGTCTTATTGGATGAGACAACTCAAGCTCTGCCTCTGTTTGTAGAGCCAACTGAAGCAAAGTCACCTGCTGTGAATGGAGAATTAGTCATTGAAGATAAACCGCAGCTTGCCTTGGCACAAGAACCCATAGTGGCAGAGCACTAA 1428 0.4328 MMDACNLLLANGLEEVHQNGVHGKLSNSGKDGIASNVDSAVTQVTQAEAPNGIFENFIQYDSIATDYSSKAEIKEGSNDYIGVNNFTISKEEEAEIIVQTEQLKAGKGPVKNKNAKSPSPRGVHASLMKKSKDGKDEVVASTVSNGTFASDSIPRQHIKNSSSVDKQARLSKHPGKSNVAPSEASMEKTRPRLSKKGPPDNLNLQGEAESSSPTAEDAKPRRVGMLPNYGFSFKCDERAERRREFYTKLEEKIHAKEVEESNLQAKTKETQEAEIKMLRKSLGFKATPMPSFYQEPPPPRVEIKKMPTTRAKSPKLGRKKSSTVSESEGNTSNSARPGRLSLDEKVSQTNLTKGITPVHQKKPQRKSLPPRLTSEKTSSSNSASVRTPSKAVNDDKTSLSSVTTEVTSLSISTGEEKVEIAAATEESKVLLDETTQALPLFVEPTEAKSPAVNGELVIEDKPQLALAQEPIVAEH* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01891 475 MobiDBLite consensus disorder prediction 138 168 - -
Lapu9g01891 475 MobiDBLite consensus disorder prediction 370 414 - -
Lapu9g01891 475 Coils Coil 246 276 - -
Lapu9g01891 475 MobiDBLite consensus disorder prediction 279 414 - -
Lapu9g01891 475 Pfam Targeting protein for Xklp2 (TPX2) domain 231 302 IPR027329 -
Lapu9g01891 475 MobiDBLite consensus disorder prediction 318 357 - -
Lapu9g01891 475 MobiDBLite consensus disorder prediction 103 229 - -
Lapu9g01891 475 PANTHER PROTEIN WVD2-LIKE 4 99 412 IPR044833 GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01891 Lapu-Chr9 33712160 33719639 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01891 - - gsj:114408962 702.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01891 9 33712160 33719639 Lapu9g01891 9 33712160 33719639 ECH
Lapu8g00618 8 23829148 23835331 Lapu9g01891 9 33712160 33719639 PCT