Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00618 ATGGATCCAATTAACCTTTTACCTACTGATGGGGTTGAAGTGGTCCACCAAAATGGTGTCCATGATGAACCTTCTCATTCTGGGGAGGATGGTGGTGCTTCATATGATTTAGACCCCAGTATCGCTGAAACTGCTGAAACTGTAGCTTCGAATGGAAATTTTGATAATTTCCATCAGTCGGATAGTGCTGCAATTGACAACTCATATGTGGCAGAAATCAAAGAATCAAATGAGATTATTGATGGCAATAACATGATCATTCCTAAGGAAGAGGATCTGAAAATATCAGATCAAACAAAACAATCAAGAGCACCAAAGGGTCTTGTCAAGAATAAGAATGCAAAGGCTCCAAGTTCTGGTGGTGCTCAAGCAAGTTTGGTGAATAAGAGCAAAATTGGAAAAGATAAAGAAGTATCCACATCTGTTTCAAATGGTACTTTAGCTTTAGACTCTCGCTCAAAACAGTCTATTAAAAGCAGCAGATCATTCAATGATCGGCAGACTCAATTATCTAAACCCAAGCACCCTTTGAAGTCTGATGAAGCATCTTCTGAAGTATCAATGGAGAAGACGAAACCAAAATCATTGACAAAAGGACCTGTTGTTAAAGATCAAGGAGAAGTAGATTCTTCCTTGTATCCTTTTTTGGGTTTAAGTACCAACAATGAAGATGCCAAACCTCAAAGGGTGGGGACACTTCCAAATTATGGATTCAGTTTTAAGTGTGGTGAACGAGCAGAGAGAAGAAAAGAGTTCTATAATAAGCTAGAGGAAAGGATTCAGGCAAAAGAGGTGGAGAAGAGTAACTTGCAAGCAAAAACCAAGGAGACCCAAGATGCCGAGATTAAGAAGCTTAGGAAGAGTCTAAATTTTAAAGCAACTCCAATGCCTAGTTTTTATCAGGAGCCTGCTCCTCCTAAGGTTGAGCTAAAGAAGATACCAACTACAAGGCCAAAATCTCCCAAGTTTGGACGTAAGAAGACTTCAGCTAATTCAGAGTCAGATGGAAACACTAGCAACAGTTCAAGATTAGGTCGCTTAAGTCTGGATGAGAAAGTGTCAGAGACTGACCCCAGTAAGGGACCTACTCCTGTCCTTCAAAAGAAGCCGTATCGAAGATCTCTTCCTTCTCGTCTGGCTCCTGAAAGGAACAGTGTATCAAAATCAACAACTGCACTGACTTCATCCAAGGCTGTCAAAGATGAAAAATCTTCCTTATCTCTTGCCGCCAAAAAAGATACCAGCATATCCAATGCTACAGGAGAAGAGAAAACCGTTACGGTTGAAGCAAATGAGAAAAGTATCTTGTCCAGTGAAACAAGTGATGCTGTGCCTCTGAATGTGGTTCCTTCAGACGATAAGCCAAGTGAAGAAGACTCTCATGGGAATGTTGATATAGTAGTTGAAGAAAATCCTCTGCCCCCCTTGGCACAAGAACCTGTTGCTGCGGAGCAATGA 1458 0.4102 MDPINLLPTDGVEVVHQNGVHDEPSHSGEDGGASYDLDPSIAETAETVASNGNFDNFHQSDSAAIDNSYVAEIKESNEIIDGNNMIIPKEEDLKISDQTKQSRAPKGLVKNKNAKAPSSGGAQASLVNKSKIGKDKEVSTSVSNGTLALDSRSKQSIKSSRSFNDRQTQLSKPKHPLKSDEASSEVSMEKTKPKSLTKGPVVKDQGEVDSSLYPFLGLSTNNEDAKPQRVGTLPNYGFSFKCGERAERRKEFYNKLEERIQAKEVEKSNLQAKTKETQDAEIKKLRKSLNFKATPMPSFYQEPAPPKVELKKIPTTRPKSPKFGRKKTSANSESDGNTSNSSRLGRLSLDEKVSETDPSKGPTPVLQKKPYRRSLPSRLAPERNSVSKSTTALTSSKAVKDEKSSLSLAAKKDTSISNATGEEKTVTVEANEKSILSSETSDAVPLNVVPSDDKPSEEDSHGNVDIVVEENPLPPLAQEPVAAEQ* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00618 485 MobiDBLite consensus disorder prediction 17 37 - -
Lapu8g00618 485 MobiDBLite consensus disorder prediction 288 485 - -
Lapu8g00618 485 MobiDBLite consensus disorder prediction 380 402 - -
Lapu8g00618 485 MobiDBLite consensus disorder prediction 137 170 - -
Lapu8g00618 485 PANTHER PROTEIN WVD2-LIKE 4 97 439 IPR044833 GO:0008017
Lapu8g00618 485 Coils Coil 253 280 - -
Lapu8g00618 485 MobiDBLite consensus disorder prediction 85 99 - -
Lapu8g00618 485 MobiDBLite consensus disorder prediction 79 205 - -
Lapu8g00618 485 MobiDBLite consensus disorder prediction 409 445 - -
Lapu8g00618 485 MobiDBLite consensus disorder prediction 325 347 - -
Lapu8g00618 485 Pfam Targeting protein for Xklp2 (TPX2) domain 238 309 IPR027329 -
Lapu8g00618 485 MobiDBLite consensus disorder prediction 171 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00618 Lapu-Chr8 23829148 23835331 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00618 - - gmx:100786958 727.243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu8g00618 8 23829148 23835331 Lapu8g00618 8 23829148 23835331 ECH
Lapu8g00618 8 23829148 23835331 Lapu9g01891 9 33712160 33719639 PCT