Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01881 ATGGGTAGGAGGAGAATACAACTGGTTGATGAGAAAAAGGATGGGTTTTTCTCTGTCAGCTGCTTGGGGTTCCAATCCGAAGATAGGTGCTACCAATTCGGAGGCTTGTTTGCCAGTGTTAGTCAAATGGGAATGGGGGTCGGCGTGCAACCAAGTGACCCTTCTGATTCGCGCGACAATGGTGACACAAAACTTCCCTTCAATGAACTGTTCATCAAGTACCAGGGAAAAGATGAGGTTGTTGAAGAAAGGGTTGATGGCAAGAAGAGAAAGGGTGGTATTTCACTAAGGCTTAAGATCAGAAACCCTTCACTGAGAAGGTTGTTTAGTGGGGCAATAGCTGGGGCTGTGTCTCGCACTGCTGTGGCACCTTTGGAGACTATAAGAACTCTTATGATGGTGGGGAGTAGTGACCATTCCACCACTGAGGTGTTCCACAATATCGTGAAAACTGATGGCTGGAAGGGCTTGTTTAGGGGTAATTTTGTTAATGTCATTCGGGTTGCGCCTAGCAAGGCCATTGAGCTATTTACATTCGATACAGTGAACAAGAACCTATCCCCAAAGCCTGGGGAGCAGTCCAAATTCCCAATTCCTGCATCATTGATTGCTGGTGCCTGTGCTGGAGTGAGTTCAACTATCTGTACATATCCTCTTGAATTAGTCAAGACTCGACTAACTGTCCAGAGAGATGTTTATGATGGTCTGCTTCATGCATTCTTGAAAATAATTCGAGAAGAGGGTCCTGGGGAACTTTACAGTGGCCTTGCAGCTAGTCTTATCGGAGTTGTCCCCTATGCTGCAGCCAATTACTATGCTTATGACACTTTAAAGAAAGCATACAGGAAAGTTTTTAAACAAGAGAAGGTGGGGAATATTGAAACCCTTTTGATCGGTTCGGTAGCTGGTGCTATTTCAAGTAGTTCAACTTTTCCACTGGAGGTAGCTCGCAAGCAAATGCAGCTTGGTACCCTCAGTGGAAGGCAGGTTTACAAGAATGTGTTTCATGCACTTGCGTGCATACTAGAGCAAGAAGGGATCCAAGGTCTATACAGAGGGTTGGTACCTAGTTGCATGAAGTTGATACCAGCCGCCGGAATCTCTTTCATGTGCTACGAAGCATGCAAGAGGATATTTCTAGAGAACGATGAGGAGGATTAG 1161 0.4556 MGRRRIQLVDEKKDGFFSVSCLGFQSEDRCYQFGGLFASVSQMGMGVGVQPSDPSDSRDNGDTKLPFNELFIKYQGKDEVVEERVDGKKRKGGISLRLKIRNPSLRRLFSGAIAGAVSRTAVAPLETIRTLMMVGSSDHSTTEVFHNIVKTDGWKGLFRGNFVNVIRVAPSKAIELFTFDTVNKNLSPKPGEQSKFPIPASLIAGACAGVSSTICTYPLELVKTRLTVQRDVYDGLLHAFLKIIREEGPGELYSGLAASLIGVVPYAAANYYAYDTLKKAYRKVFKQEKVGNIETLLIGSVAGAISSSSTFPLEVARKQMQLGTLSGRQVYKNVFHALACILEQEGIQGLYRGLVPSCMKLIPAAGISFMCYEACKRIFLENDEED* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01881 386 Gene3D Mitochondrial carrier domain 100 384 IPR023395 -
Lapu9g01881 386 ProSiteProfiles Solute carrier (Solcar) repeat profile. 290 378 IPR018108 -
Lapu9g01881 386 PRINTS Mitochondrial carrier protein signature 253 271 IPR002067 GO:0055085
Lapu9g01881 386 PRINTS Mitochondrial carrier protein signature 107 120 IPR002067 GO:0055085
Lapu9g01881 386 PRINTS Mitochondrial carrier protein signature 211 229 IPR002067 GO:0055085
Lapu9g01881 386 PRINTS Mitochondrial carrier protein signature 160 180 IPR002067 GO:0055085
Lapu9g01881 386 PRINTS Mitochondrial carrier protein signature 299 321 IPR002067 GO:0055085
Lapu9g01881 386 PRINTS Mitochondrial carrier protein signature 120 134 IPR002067 GO:0055085
Lapu9g01881 386 ProSiteProfiles Solute carrier (Solcar) repeat profile. 102 185 IPR018108 -
Lapu9g01881 386 SUPERFAMILY Mitochondrial carrier 103 374 IPR023395 -
Lapu9g01881 386 Pfam Mitochondrial carrier protein 290 382 IPR018108 -
Lapu9g01881 386 Pfam Mitochondrial carrier protein 104 186 IPR018108 -
Lapu9g01881 386 Pfam Mitochondrial carrier protein 197 283 IPR018108 -
Lapu9g01881 386 ProSiteProfiles Solute carrier (Solcar) repeat profile. 196 280 IPR018108 -
Lapu9g01881 386 PANTHER SOLUTE CARRIER FAMILY 25 104 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01881 Lapu-Chr9 33600402 33604315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01881 1 385 Organic Solute Cotransporters AT4G32400 64.796 3.13e-176 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01881 K14684 - gmx:100810035 643.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01881 9 33600402 33604315 Lapu9g01881 9 33600402 33604315 ECH
Lapu8g00610 8 23717912 23721598 Lapu9g01881 9 33600402 33604315 PCT