Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00610 ATGGGTCGGAGAGGGATCAAGCTCTTTGATGAAGAAAGGAATGGTCTTTTCTCAATTTCCAATTTTGGGTCTCAATGGGATGCCGGTGTTCACGACCCTGTGGCTATGTTTGCTAGCGTTAGTCAAATGGGGATGGGGTTCGGTGTTCAAGAGCCGAATCCTTCTTCCTCTGGTGATTCCCAGCACAATGGTGGCATGAACATTAGGATCCCTTGCACTGAGTTGTACGTTAGGTATATTCAATCAGAGGGGAAGGTGAAGATTATTGGGGTTCCTGGGGAAGAAGAGGCGGTGACGGATGTTAAGGGGAAGAAAAAGGGTGTCTTTAAAGGGATGAAGATCAAGGTGAAGAACCCTTCTCTTAGGAGGTTGATTAGTGGTGCCTTTGCTGGGGCAGTGTCACGAACTGCTGTGGCACCCTTGGAGACCATTAGGACTCATTTGATGGTAGGAAGTAGTGGGAATTCTACTGGGGAGGTGTTCAACAATATCATGAAGACTGATGGATGGAAGGGCTTGTTTAGGGGTAATTTTGTTAATGTGATTCGGGTTGCACCTAGCAAGGCCATTGAGCTGTTTGCATATGATACTGTAAACAAGAACCTCTCACCAAAGCCAGGGGAGCAGCCTAAACTCCCTATTCCACCATCATTGATAGCAGGTGCTTGTGCTGGAGTTAGTTCAACGATTTGCACATATCCTCTGGAGTTACTAAAGACTCGACTAACTATCCAGAGGGGTGTTTATGATGGTCTACTAGATGCATTCCTGAAAATAGTGAGAGAAGAGGGTGCTGGAGAACTTTACAGAGGCCTCACTCCCAGTCTTATTGGAGTAATACCATATTCTGCCACCAATTACTTTGCATATGACACCTTGAGGAAAGCATACAGAAAAATTTTCAAAAAAGAGAGGATTGGCAACATTGAAACCCTTTTGATAGGATCAGCAGCTGGTGCTATTTCAAGTAGTGCTACCTTTCCTCTTGAAGTGGCTCGCAAGCACATGCAAGTGGGAGCCCTCAGTGGAAGGCAGATATACAAAAATGTGATTCATGCCCTTGCAAGCATTCTTGAGCAAGAAGGGGTTCAAGGATTGTACAAAGGGTTGGGACCTAGCTGCATGAAGTTGGTGCCTGCTGCAGGAATTTCTTTCATGTGCTATGAAGCATGCAAGAGGATACTGATAGAGGACGATGAGGAGGAGTAG 1209 0.4574 MGRRGIKLFDEERNGLFSISNFGSQWDAGVHDPVAMFASVSQMGMGFGVQEPNPSSSGDSQHNGGMNIRIPCTELYVRYIQSEGKVKIIGVPGEEEAVTDVKGKKKGVFKGMKIKVKNPSLRRLISGAFAGAVSRTAVAPLETIRTHLMVGSSGNSTGEVFNNIMKTDGWKGLFRGNFVNVIRVAPSKAIELFAYDTVNKNLSPKPGEQPKLPIPPSLIAGACAGVSSTICTYPLELLKTRLTIQRGVYDGLLDAFLKIVREEGAGELYRGLTPSLIGVIPYSATNYFAYDTLRKAYRKIFKKERIGNIETLLIGSAAGAISSSATFPLEVARKHMQVGALSGRQIYKNVIHALASILEQEGVQGLYKGLGPSCMKLVPAAGISFMCYEACKRILIEDDEEE* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00610 402 ProSiteProfiles Solute carrier (Solcar) repeat profile. 118 201 IPR018108 -
Lapu8g00610 402 Pfam Mitochondrial carrier protein 306 397 IPR018108 -
Lapu8g00610 402 Pfam Mitochondrial carrier protein 119 202 IPR018108 -
Lapu8g00610 402 Pfam Mitochondrial carrier protein 212 299 IPR018108 -
Lapu8g00610 402 SUPERFAMILY Mitochondrial carrier 119 390 IPR023395 -
Lapu8g00610 402 PRINTS Mitochondrial carrier protein signature 176 196 IPR002067 GO:0055085
Lapu8g00610 402 PRINTS Mitochondrial carrier protein signature 227 245 IPR002067 GO:0055085
Lapu8g00610 402 PRINTS Mitochondrial carrier protein signature 123 136 IPR002067 GO:0055085
Lapu8g00610 402 PRINTS Mitochondrial carrier protein signature 269 287 IPR002067 GO:0055085
Lapu8g00610 402 PRINTS Mitochondrial carrier protein signature 315 337 IPR002067 GO:0055085
Lapu8g00610 402 PRINTS Mitochondrial carrier protein signature 136 150 IPR002067 GO:0055085
Lapu8g00610 402 Gene3D Mitochondrial carrier domain 114 400 IPR023395 -
Lapu8g00610 402 PANTHER SOLUTE CARRIER FAMILY 25 112 395 - -
Lapu8g00610 402 ProSiteProfiles Solute carrier (Solcar) repeat profile. 306 394 IPR018108 -
Lapu8g00610 402 ProSiteProfiles Solute carrier (Solcar) repeat profile. 212 296 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00610 Lapu-Chr8 23717912 23721598 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00610 1 401 Organic Solute Cotransporters AT4G32400 62.963 1.02e-179 504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00610 K14684 - gmx:100816041 682.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu8g00610 8 23717912 23721598 Lapu8g00610 8 23717912 23721598 ECH
Lapu8g00610 8 23717912 23721598 Lapu9g01881 9 33600402 33604315 PCT