Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01849 ATGAGCACTCTATCTGAAGCCTACGAAGCACACCCTCTCCACCTTGGAGATATCATCCCCTTAGATTTTTCTTCATCCTCCACCTTACCTGATTCCCATGCATGGTTTCAACCCAATGATGAGCATTTCTCAGTCGATGATCCTGAATCATCATCCATGCCCGTCATTGACCTCTTGGATCCCAAAGCCACAGAGCTCATAGGCCATGCATGTGAGAACTGGGGTGGTTTCCAGTTGAAGAATCATGGCATACCCTTGGATGTTATTCAAGGTGCAGAAGAAGAAGCCAAACGCCTCTTCTCTCTCCCTACTGAACAAAAGTTGAAGGCTCTTAGATCTCCCGGTGGTGCTTCTGGATATGGCAGAGCTAGAATTTCACCTTTCTTCCCAAAGGCCATGTGGCACGAAGGATTCACCATCATTGATTCTCCCTCTCATGATGTCAAAAAGATATGGCCTAATGACTATGCTAGGTTTTGTGAGAGAATGGAGGATTATGAGAAGCAAATGAAGGTTCTAGCGGAGCGGCTAACAGAGATGCTGCTGGACTTATTGAAGATTCCTGAGGAAGAAAGAAAGTGGGTTGGTGCAAGCGACATAAGTAAAGCTCTTCAGCTGAATTTCTACCCTAGTTGTCCTGAACCAAACCGAACCATGGGTTTAGCCCCTCACACTGACACTTCTATCTTAACCATTGTTCAAAGTCCATCAAGTGGTCTCCAACTCTTCAAGGAAGGAAAAGGGTGGATCCCTGTGCACCCTTACCCTAACGCTCTCATCATTCACTTAGGAGATCTCTTGCACATCATATCCAATGGACGCTTCTGCAGCCCTCTTCACCGCGTAACGCTGAATGACACTCGCAAACGTTACTCCATCGCTTATTTCTATTCTCCACCGATAGATCATCTTCTCTCTCCCTTCCTCACTCAGGATCATTTTAACTCTGCTGCTCGTTTTCGTCATGTCACTGTGAAGGAGTACATTGAGATTAAGGCTCAGAATTTTGGAAACTCCCTGTCTTTTGTTAGGACTTGA 1038 0.4576 MSTLSEAYEAHPLHLGDIIPLDFSSSSTLPDSHAWFQPNDEHFSVDDPESSSMPVIDLLDPKATELIGHACENWGGFQLKNHGIPLDVIQGAEEEAKRLFSLPTEQKLKALRSPGGASGYGRARISPFFPKAMWHEGFTIIDSPSHDVKKIWPNDYARFCERMEDYEKQMKVLAERLTEMLLDLLKIPEEERKWVGASDISKALQLNFYPSCPEPNRTMGLAPHTDTSILTIVQSPSSGLQLFKEGKGWIPVHPYPNALIIHLGDLLHIISNGRFCSPLHRVTLNDTRKRYSIAYFYSPPIDHLLSPFLTQDHFNSAARFRHVTVKEYIEIKAQNFGNSLSFVRT* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01849 345 Gene3D - 22 337 IPR027443 -
Lapu9g01849 345 Coils Coil 156 183 - -
Lapu9g01849 345 FunFam Gibberellin 3-beta-dioxygenase 1 17 331 - -
Lapu9g01849 345 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 199 299 IPR005123 -
Lapu9g01849 345 SUPERFAMILY Clavaminate synthase-like 19 337 - -
Lapu9g01849 345 Pfam 2OG-Fe(II) oxygenase superfamily 204 299 IPR044861 -
Lapu9g01849 345 Pfam non-haem dioxygenase in morphine synthesis N-terminal 54 153 IPR026992 -
Lapu9g01849 345 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 53 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01849 Lapu-Chr9 33356046 33357188 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01849 64 330 Glycosyltransferase AT5G59530 29.749 1.96e-30 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01849 K04124 - gmx:100818754 522.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01849 9 33356046 33357188 Lapu8g00579 8 23252153 23254061 PCT