Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00579 ATGGCCACAACTCTCTCTGAAGCCTATAGAGACCACCCTCTCCACCTCCATCATATTATCCCCTTAGACTTTTCTTCACTTAGGACCTTACCTGATTCCCATGCATGGCCTCAATCTGAAGATGTTGATGCTGATGTTGTTGTTGATGTTGATGATGATGATAATCATGGGGGTGGATCATCCATACCCATCATTGACCTCATGGATCCTAATGCCATGGAACTCATAGGCCTTGCTTGTGAGAAGTGGGGTGCCTTCCAATTGAAGAACCATGGCATACCCTTAAGTGTGGTTGAAGAGGTTGAAGAAGAGGCAAAGAGGCTCTTTGCCCTCCCCGCCGACCGGAAATTGAAGGCCCTACGATCCGCCGCTGGGGCCACCGGCTACGGCCGGGCACGGATATCATCATTCTTCCCCAAACACATGTGGCATGAAGGATTCACCATCATGGGGTCTCCATGCGATGATGCCAAAAAGATTTGGCCTAATGACCATTCACGGTTTTGCAACACAATGGAGAAGTACCAGAAGCAAATGAAGTTGCTGGCAGAGAAGCTAACCCACATGATATTAACGTTGTTGGGGATTTCTGAGGAACAAAAGGGGTGGATTGGTTCGAGTAACCTCTGTGAAGCTGTTCAGCTGAACTTCTACCCTTGTTGCCCTGAGCCTAACCGAGCCATGGGTCTAGCCCCTCACACGGACACTTCCCTCTTCACAATCCTCCACCAAAGCCAAACCAATGGCCTCCAAATCTTCAAGGAGGGTGCAGGGTGGGTGTCTGTGCACCCTCACCCTAACACCCTTGTTGTTCACACTGGTGACATTCTTCACATCTTGTCCAACTCAAGGTTCCGTTGTGCACTGCATCGTGTCATGGTGAACAGTGCAAGGCAAAGATACTCTGTGGCTTATTTCTATGGCCCCCCTTTGGATTTTGTGGTTTCTCCATTGCTTCTTCTTACTTCCTTGCCACGTTTTCGTTCTTTGTCTGTGAAGGAGTATATTGGCATCAAGGCCAAGAACCTTGGTGAAGCATTGTCTTTGATTAGTACCATTCAAAACTAA 1068 0.4831 MATTLSEAYRDHPLHLHHIIPLDFSSLRTLPDSHAWPQSEDVDADVVVDVDDDDNHGGGSSIPIIDLMDPNAMELIGLACEKWGAFQLKNHGIPLSVVEEVEEEAKRLFALPADRKLKALRSAAGATGYGRARISSFFPKHMWHEGFTIMGSPCDDAKKIWPNDHSRFCNTMEKYQKQMKLLAEKLTHMILTLLGISEEQKGWIGSSNLCEAVQLNFYPCCPEPNRAMGLAPHTDTSLFTILHQSQTNGLQIFKEGAGWVSVHPHPNTLVVHTGDILHILSNSRFRCALHRVMVNSARQRYSVAYFYGPPLDFVVSPLLLLTSLPRFRSLSVKEYIGIKAKNLGEALSLISTIQN* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00579 355 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 206 309 IPR005123 -
Lapu8g00579 355 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 62 335 - -
Lapu8g00579 355 Pfam 2OG-Fe(II) oxygenase superfamily 212 309 IPR044861 -
Lapu8g00579 355 SUPERFAMILY Clavaminate synthase-like 17 342 - -
Lapu8g00579 355 FunFam Gibberellin 3-beta-dioxygenase 1 18 338 - -
Lapu8g00579 355 Gene3D - 18 343 IPR027443 -
Lapu8g00579 355 Pfam non-haem dioxygenase in morphine synthesis N-terminal 62 162 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00579 Lapu-Chr8 23252153 23254061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g00579 62 335 Glycosyltransferase AT5G59530 29.730 8.21e-34 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00579 K04124 - gmx:100808546 598.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01849 9 33356046 33357188 Lapu8g00579 8 23252153 23254061 PCT