Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01844 ATGCTGAAGCAATTCCTCAGCAGACTCCCCCGCAAGACACCGAAACCTGACTCGGATGAGTCATGCCGAGCCGACTCGTCGCGCTCGGACGATTCCCTACGCACCGCGGGCAGAAACGGTCGTGCGCAGGGAGGCGCTGCCGCTTCAAATGCTGTGAAACGGACATCCTCGTCTGCTGTATTTCCGGCCAGCACGGTGTCGGTGATAGAACCTCTGGTGCCGTTCAAGGATGTTCCGAACTCGGAAAAGATGAACCTTTTCGTGAGCAAGCTGAGTCTGTGTTGCGTGACTTTCGATTTCATGGACCCTGGTAAGAACACCGTGGAAAAAGAGGTGAAGAGAAGAACCCTTGTTGAACTCGTTGATTTTGTTTCCTCTTGTGGGTCCTCGAGGTTCGGTGAACCTGCTATTCTAGCAGTCTGTAGAATGTGTGCTATTAATCTCTTTCGGGTTTTTCCGCCAAATTATAGGTCTAATCGTGGTGGTGAGAATGATGATGATGAGCCAGCTTTTGATCCCGCATGGCCTCATTTGCAACTTGTGTATGAGTTGCTACTCAAGTTTATAACCTCAAACTGTCTTGATGCTAAGGTGGCCAAGAAGTACATTGACCATTCTTTTATTTTAAGGTTGTTGGAGTTGTTTGATTCGGAGGATCCTAGGGAGAGGGACTGCTTGAAGACCATTATGCATAGGGTTTATGGCAAGTTCATGGTGCATAGGCCCTACATAAGAAAATCCATTAACAACTTGTTTTTTAAGTTTGTGTTTGAGACTGAGAGGCACAATGGGATTGCCGAGTTGTTGGAGATTTTTGGGAGCATAATTAGTGGGTTCGCGTTACCTTTGAAAGAGGAACACAAAATCTTCTTGTGGAGGGTTTTGATCCCCTTGCACAAGCCCAAGTCTATGGGGGTGTACTTCCAGCAGTTGTCTTACTGCGTTACCCAGTTCGTCGAGAAAGAGCCTAAGTTGGCAAGCATTGTCATCAGGGGGTTGTTGAAGTATTGGCCAATAACAAGTAGTCAGAAAGAGGTGATGTTCCTGGGTGAACTGGAAGAAATTTTGGAAACAATTAACATGGTAGAGTTCCAGAGGGTCATGGTACCGTTGTTTTGGCGGATTGGATGCTGTATTAACAGTATGCACTTTCAGGTATCTGAAAGAGCCCTTTTCTTATGGAACAACGACCATATTGTCAACTTGATTGCTCACAACCGACAAGTGATCCTGCCAATCATGTTTCCAGCTTTAGAGAAGAATTCTCAGGGCCACTGGAGCCAAGCAGTGCTCAACTTAACTCATAATGTTAGAAAAATGTTTGCAGAGATGGATGAGAAGCTATTCCTGGCTTGTCATTCCCAGTTTAAGGAAGAAGAAGCAATGCTGAACGTGGCGGCGGAGAAGCGGAAGGAAGCATGGAAACAACTAGAGCATGAAGCCAGTCTCCAGCCTGTGATGGGAAATACCGCAGTTTTAGTGTCTCCAATTTCATAA 1497 0.4629 MLKQFLSRLPRKTPKPDSDESCRADSSRSDDSLRTAGRNGRAQGGAAASNAVKRTSSSAVFPASTVSVIEPLVPFKDVPNSEKMNLFVSKLSLCCVTFDFMDPGKNTVEKEVKRRTLVELVDFVSSCGSSRFGEPAILAVCRMCAINLFRVFPPNYRSNRGGENDDDEPAFDPAWPHLQLVYELLLKFITSNCLDAKVAKKYIDHSFILRLLELFDSEDPRERDCLKTIMHRVYGKFMVHRPYIRKSINNLFFKFVFETERHNGIAELLEIFGSIISGFALPLKEEHKIFLWRVLIPLHKPKSMGVYFQQLSYCVTQFVEKEPKLASIVIRGLLKYWPITSSQKEVMFLGELEEILETINMVEFQRVMVPLFWRIGCCINSMHFQVSERALFLWNNDHIVNLIAHNRQVILPIMFPALEKNSQGHWSQAVLNLTHNVRKMFAEMDEKLFLACHSQFKEEEAMLNVAAEKRKEAWKQLEHEASLQPVMGNTAVLVSPIS* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01844 498 PIRSF PP2A_B56 4 495 IPR002554 GO:0000159|GO:0007165|GO:0019888
Lapu9g01844 498 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 74 481 IPR002554 GO:0000159|GO:0007165|GO:0019888
Lapu9g01844 498 SUPERFAMILY ARM repeat 85 477 IPR016024 -
Lapu9g01844 498 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 482 IPR002554 GO:0000159|GO:0007165|GO:0019888
Lapu9g01844 498 Gene3D - 79 480 IPR011989 -
Lapu9g01844 498 MobiDBLite consensus disorder prediction 10 35 - -
Lapu9g01844 498 MobiDBLite consensus disorder prediction 1 50 - -
Lapu9g01844 498 FunFam Serine/threonine protein phosphatase 2A regulatory subunit 79 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01844 Lapu-Chr9 33305000 33307975 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01844 K11584 - gmx:100808283 908.672
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01844 9 33305000 33307975 Lapu9g01844 9 33305000 33307975 ECH
Lapu8g00575 8 23192397 23196009 Lapu9g01844 9 33305000 33307975 PCT