Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g00575 ATGCTCAAGCAAATCCTCAGCAAACTTCCTCGGAAGTCGTTGAAACCCGACTCGGACGAGTCAACTTGGGGTGACTCGGCGCGTTCCGCCGATTCGCCACGCGCCGCCAGCAAAAGCCAACGACCACATGGCGGCAGTTCCTCCGCCGCGAAGCGAGCTTCGTCATCGGCGGTGTTTCCGGCGAGTATGGTGTCCGGATTTGAGCCTTTGGTGCCGTTTAAGGATGTTCCTAATGCTGAGAAGATGAACCTGTTTGTGAGCAAGTTGAGCCTTTGTTGTGTCACATTTGATTTCAGTGACCCTAGCAAGAGCGTTGCAGATAAAGATGTGAAAAGGAAGACTTTGGTTGAGCTTGTTGATTTTGTGGCTTGTGGAGCAATGAGGTTTAGTGAGCCTGCTATCCTTGCTTTGTGTAGAATGTGTGCTTTCAATTTGTTTAGAGTTTTCCCTCCCAATTATAGGACAGGTGGTGGGGAGAATGATGATGATGAGCCTATGTTTGATCCTGCTTGGCCACATTTGCAACTTGTGTATGAATTGCTGCTTAAGTTTATCTCTTCTTCGTGCCTCGATGCGAAGGTGGCGAAAAAGTTTATTGATCATTCCTTTATTGCCAGATTGCTTGAGTTGTTTGATTCGGAGGATCCTAGGGAAAGGGATTGCTTGAAGGCGATTCTGCATAGGATTTACGGAAAGTTCATGGTGCATAGACCCTATATTCGGAAATCTATTAACAATATATTTTATCGATTCGTGTTTGAGACTGAGAAGCACAGTGGGATTGGTGAGTTGTTGGAGATTTTTGGGAGTGTGATTACTGGGTTTGCTCTACCCTTGAAAGAGGAACACAAAATCTTCTTGTGGAGGGTTTTGGTCCCTTTGCACAAGCCGAAGTCAATCGGGGTCTACTTTCAGCAATTGTCCTACTGTGTTATGCAGTTCATAGAGAAGGAGCCCAAGTTAGCGAGCATTGTGATTAGGGGTTTGTTGAAATATTGGCCAGCAACAAATAGCCAGAAAGAGGTGATCTTTCTGGGTGAGCTGGAAGAAATTTTGGAAGTAATTAACATGGTAGAGTTCCAGAGGATCATGGTTCCTTTGTTTTGGCGGATTGGATGCTGCATAAACAGCTTACACTTTCAGGTATCTGAAAGGGCCCTTTTCTTATGGAACAATGACCATATTGTCAACTTGATTGCACATAACCGGCAAGTGATCCTGCCCATCATATTTCCAGCTTTAGATAGGAATGTTCAAAGCCATTGGAACCCGGCAGTTGTCAACCTAACTCACAATATTAGAAAGATGTTCTTGGAGATGGATGAGAAGCTCTTCATTTCTTGTCATAATCACTTTAAGGAGGAAGAAGCAATCTTGATCTCTGCAGCAGAGAAGCGAAAGGAGGCATGGGAACAGCTAGAGCATGCCGCCAGTCTCAGGCCTGTTATTGGAAACACTGCAGTTTTAGTGTCCTGA 1476 0.4512 MLKQILSKLPRKSLKPDSDESTWGDSARSADSPRAASKSQRPHGGSSSAAKRASSSAVFPASMVSGFEPLVPFKDVPNAEKMNLFVSKLSLCCVTFDFSDPSKSVADKDVKRKTLVELVDFVACGAMRFSEPAILALCRMCAFNLFRVFPPNYRTGGGENDDDEPMFDPAWPHLQLVYELLLKFISSSCLDAKVAKKFIDHSFIARLLELFDSEDPRERDCLKAILHRIYGKFMVHRPYIRKSINNIFYRFVFETEKHSGIGELLEIFGSVITGFALPLKEEHKIFLWRVLVPLHKPKSIGVYFQQLSYCVMQFIEKEPKLASIVIRGLLKYWPATNSQKEVIFLGELEEILEVINMVEFQRIMVPLFWRIGCCINSLHFQVSERALFLWNNDHIVNLIAHNRQVILPIIFPALDRNVQSHWNPAVVNLTHNIRKMFLEMDEKLFISCHNHFKEEEAILISAAEKRKEAWEQLEHAASLRPVIGNTAVLVS* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g00575 491 MobiDBLite consensus disorder prediction 1 52 - -
Lapu8g00575 491 FunFam Serine/threonine protein phosphatase 2A regulatory subunit 77 476 - -
Lapu8g00575 491 SUPERFAMILY ARM repeat 83 472 IPR016024 -
Lapu8g00575 491 MobiDBLite consensus disorder prediction 10 24 - -
Lapu8g00575 491 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 72 477 IPR002554 GO:0000159|GO:0007165|GO:0019888
Lapu8g00575 491 MobiDBLite consensus disorder prediction 25 52 - -
Lapu8g00575 491 Gene3D - 77 476 IPR011989 -
Lapu8g00575 491 PIRSF PP2A_B56 4 488 IPR002554 GO:0000159|GO:0007165|GO:0019888
Lapu8g00575 491 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 478 IPR002554 GO:0000159|GO:0007165|GO:0019888
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g00575 Lapu-Chr8 23192397 23196009 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g00575 K11584 - gmx:100781390 914.835
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu8g00575 8 23192397 23196009 Lapu9g01844 9 33305000 33307975 PCT