Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01824 ATGGGGTTGATGGGGGGTGGAAAGTTTGGAAGGTGTGATTTTGTTGTTGTTGTTGTTGTTGTGTTGGTGGTTTTAGTGGGGTCAGTGAGTGGGATTGGTGTGAACTGGGGGACACGGTCGACACACCCTTTGTCTCCTTCGAAGGTGGTGAAGATGCTGAAGGACAATGGCATTCAGAAGGTGAAGCTTTTTGATGCTGATCCTGGTATCTTGGATGCTCTCAAGAAGTCTGGGATACAAGTCATGGTGGGGATTCCCAATGACATGCTTTATACGCTCGCTAACAGTGTTGAAGCAGCTGAAAAATGGGTTTCCAAGAATGTTTCCAAACATGTCTCTTCTGGAGGAGTGGACATCAGGTATGTTGCAGTGGGGAATGAACCATTCTTGTCAACTTACAATGGCACCTACGAAACCACAACTCTTCCAGCACTCCAAAACATTCAGGCAGCTCTCACAAAGTCCGGTTTGAGCAACCGTGTCAAGGTCACAGTCCCTCTAAATGCCGACGTCTACCAAAGCTCCTCAAACAAGCCATCAGACGGTGGTTTCAGACCAGACATCAACAGTGTGATGCTACAGATCGTCAAGTTCTTAAATGACAATGGTGCACCCTTCACAGTGAACATCTACCCTTTCATCAGCCTCTACGCGGACCCCAATTTCCCTGTTGACTATGCCTTCTTTAACGGCTATCAGCCTGCTATAAATGACAACGGAAGAAGCTATGACAATGTATTTGATGCTAACCATGACACTTTAGTGTGGGCACTGCAGAAGAATGGCTTTGGAAACTTGCCTATAATTGTGGGGGAAATTGGGTGGCCTACAGATGGAGACAGAAATGCAAACCTTCAATATGCACAACGTTTCAACCAAGGTTTCATGTCACGTTACATGTCTGGAAAAGGGACTCCAATGAGACCTAGTCCTATAGATGCTTATTTGTTCAGTCTCATAGATGAAGATGCCAAAAGCATTCAGCCAGGGAACTTTGAGCGTCATTGGGGGATGTTTTACTTGGACGGACAACCAAAATACCAACTTAATCTTGGGTCAGCACGAGGTAATGGGTTAGTAGGTGCTGATGGGGTTGATCACTTGGCTAAAAAGTGGTGTGTTCTGAAACCCTCAGCAAACCTTAATGATGACCAAGTAGCACCAAGTGTGGCCTATGCTTGTCAAAATGCTGATTGCACTAGTCTTGGGTATGGAACTTCATGTGGCAATTTGGATGTGCATGGTAACATTTCTTATGCGTTTAATAGTTACTATCAGGTAAATGATCAGATGGACAGTGCCTGCAAATTCCCTGGCCTTTCTATGGTCACTGACAAGGATCCTTCTGTGGGAGATTGCAAGTTCAGAATCATGATCCAGACAGATTCTGCGGGGCTACATGGAAAAGTTGGATCTCTAACTACAGTGTTGTGTTCTTTTGTCCTTTTGCTATGTTGTAATCATTTGTTCTGA 1473 0.4487 MGLMGGGKFGRCDFVVVVVVVLVVLVGSVSGIGVNWGTRSTHPLSPSKVVKMLKDNGIQKVKLFDADPGILDALKKSGIQVMVGIPNDMLYTLANSVEAAEKWVSKNVSKHVSSGGVDIRYVAVGNEPFLSTYNGTYETTTLPALQNIQAALTKSGLSNRVKVTVPLNADVYQSSSNKPSDGGFRPDINSVMLQIVKFLNDNGAPFTVNIYPFISLYADPNFPVDYAFFNGYQPAINDNGRSYDNVFDANHDTLVWALQKNGFGNLPIIVGEIGWPTDGDRNANLQYAQRFNQGFMSRYMSGKGTPMRPSPIDAYLFSLIDEDAKSIQPGNFERHWGMFYLDGQPKYQLNLGSARGNGLVGADGVDHLAKKWCVLKPSANLNDDQVAPSVAYACQNADCTSLGYGTSCGNLDVHGNISYAFNSYYQVNDQMDSACKFPGLSMVTDKDPSVGDCKFRIMIQTDSAGLHGKVGSLTTVLCSFVLLLCCNHLF* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01824 490 SMART X8_cls 371 455 IPR012946 -
Lapu9g01824 490 ProSitePatterns Glycosyl hydrolases family 17 signature. 266 279 IPR000490 GO:0004553|GO:0005975
Lapu9g01824 490 Gene3D Glycosidases 31 357 - -
Lapu9g01824 490 Gene3D - 367 464 - -
Lapu9g01824 490 Pfam Glycosyl hydrolases family 17 32 350 IPR000490 GO:0004553|GO:0005975
Lapu9g01824 490 FunFam Glucan endo-1,3-beta-glucosidase 5 31 357 - -
Lapu9g01824 490 Pfam X8 domain 371 441 IPR012946 -
Lapu9g01824 490 SUPERFAMILY (Trans)glycosidases 32 350 IPR017853 -
Lapu9g01824 490 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 23 444 IPR044965 GO:0004553|GO:0005975
Lapu9g01824 490 FunFam Glucan endo-1,3-beta-glucosidase 8 367 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01824 Lapu-Chr9 33098687 33102986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01824 14 489 Glycoside Hydrolase AT4G31140 68.410 0.0 692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01824 K19893 - gmx:100796552 929.858
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01824 9 33098687 33102986 Lapu8g00562 8 22999228 23002717 PCT