Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00981 ATGGCAAGTCAAAGCGGGGCCTCTCGAAGGAGTATTTCCTCGACGAAGAAAGCCTCCGAATCAGGAGTGCCTCAGCCTACTTCTCGAAAATCAATTACCTCTTCACGACCTGTGGCATTAGCAGGAGAGCGGACAGTGAAATCATTGCGACTTACAAAGGCCCTCACAGTACCTGAAACAACAACCATCTATGAAGCGTGTCGTCGGATGGCTGCCCGTAGAGTGGATGCTTTATTACTAACTGATTCTAATGCTTTACTCTGTGGTATCCTCACGGACAAGGATGTAGCAACAAGAGTTATTGCCAAAGAGATTAACATTGAAAACACGCCAGTTTCCAAAGTCATGACTAGGAATCCAGTATTTGTCCTTTCTGAAACTCTTGCTGCGGAAGCCCTTCAAAAGATGGTGCAAGGGAGGTTCAGACATTTACCTGTGGTGGAGAATGGAGAAGTCTTGGCTTTACTAGACATAGCAAAGTGTTTGCATGATGCCATTGCCCGTATGGAAAGGGCAGCTGAGAAAGGAAAAGCAATTGCTGCTGCCGTTGAAGGAGTTGAAAAACACTGGGGAACATCAGAATCCAATACATCATTCATTGAAACTCTCCGGGAGCAAATATTCAAGCCATCATTGTCTACAATCATTTCTGAGAATTCAAAGCTTGTAACAGTATCACCAACAGACTCGGTTCTGACAACAACAAAGAAGATGGTTGAATTTCATGAGAGTTGTGCTGTTGTGACAATTAATGACAAACCTCGTGGCATCTTTACTTCAAAAGATATCTTGTTGCGGGTAATTGCGCAAAATCTCTCTCCAGAATCAACTCCCATTGAGAAGGTCATGACTCCAAATCCAGAATGTGTAGTAATTGATACGCCCATTGTTGATGCACTTCACACTATGCATGATGGAAAATTTTTGCATCTTCCAGTGATTGATAGAGATGGCAGTGTAGTTGCTGTGGTCGATGTGATTCATGTTACTCATGCTGCAGTGGCGACAGTAAGTCAGGTTGGGAATAATGAAGCTGCAACCACGTTGATGCAAAGATTTTGGGATTCAGCTATGGCCTTAACTCCGAATGATGATGATGATGATACACGAAGTGACAGTTCCTTGAAATTGGCTTCTGATGGAGGAGAAACGGGGAGGTCCATTCCTTATCTTTCATCAAGCATGGCTAATACATTTTCCTTCAAAATACAAGATAAAAAGGGCAGAATGCACAGATTCACATGTGATACCCGGAGCATAAAAGAGGTTATAACTTCAATCCTTCAGAGACTTGGTGATGATATTGATCCTAACAACGTACCCCAAATTCTGTATGAAGATGAAGATCATGATAAAGTTGTATTGGCTTCAGACAGTGATCTTGCAGCTGCTGTGGATCACGCAAAGACTGCTGGTTTGAAGGGGTTGAAATTGCATTTAGACTACGCAGGACCACGTGGTAATGTGAAAGGTTCTCGTTCAGGAAGTTATGCTTATTCAGATGCATGGGCATCTGCGTATAGTGCTGCTGCAGCTGGAGCTGCACTTGTTGCTGGCTTAGGCATATTAACGTACTTGAAGCGAGTTTGA 1590 0.4327 MASQSGASRRSISSTKKASESGVPQPTSRKSITSSRPVALAGERTVKSLRLTKALTVPETTTIYEACRRMAARRVDALLLTDSNALLCGILTDKDVATRVIAKEINIENTPVSKVMTRNPVFVLSETLAAEALQKMVQGRFRHLPVVENGEVLALLDIAKCLHDAIARMERAAEKGKAIAAAVEGVEKHWGTSESNTSFIETLREQIFKPSLSTIISENSKLVTVSPTDSVLTTTKKMVEFHESCAVVTINDKPRGIFTSKDILLRVIAQNLSPESTPIEKVMTPNPECVVIDTPIVDALHTMHDGKFLHLPVIDRDGSVVAVVDVIHVTHAAVATVSQVGNNEAATTLMQRFWDSAMALTPNDDDDDTRSDSSLKLASDGGETGRSIPYLSSSMANTFSFKIQDKKGRMHRFTCDTRSIKEVITSILQRLGDDIDPNNVPQILYEDEDHDKVVLASDSDLAAAVDHAKTAGLKGLKLHLDYAGPRGNVKGSRSGSYAYSDAWASAYSAAAAGAALVAGLGILTYLKRV* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00981 529 MobiDBLite consensus disorder prediction 1 37 - -
Lapu9g00981 529 ProSiteProfiles CBS domain profile. 50 107 IPR000644 -
Lapu9g00981 529 SUPERFAMILY CAD & PB1 domains 390 480 - -
Lapu9g00981 529 CDD PB1_MUG70 399 483 - -
Lapu9g00981 529 SUPERFAMILY CBS-domain pair 43 160 IPR046342 -
Lapu9g00981 529 ProSiteProfiles CBS domain profile. 216 275 IPR000644 -
Lapu9g00981 529 SMART cbs_1 53 101 IPR000644 -
Lapu9g00981 529 SMART cbs_1 221 268 IPR000644 -
Lapu9g00981 529 SMART cbs_1 286 334 IPR000644 -
Lapu9g00981 529 SMART cbs_1 119 163 IPR000644 -
Lapu9g00981 529 Gene3D - 397 480 - -
Lapu9g00981 529 ProSiteProfiles CBS domain profile. 283 344 IPR000644 -
Lapu9g00981 529 SMART PB1_new 398 483 IPR000270 GO:0005515
Lapu9g00981 529 Pfam PB1 domain 398 481 IPR000270 GO:0005515
Lapu9g00981 529 ProSiteProfiles PB1 domain profile. 396 483 IPR000270 GO:0005515
Lapu9g00981 529 Pfam CBS domain 51 98 IPR000644 -
Lapu9g00981 529 Pfam CBS domain 219 265 IPR000644 -
Lapu9g00981 529 Pfam CBS domain 112 156 IPR000644 -
Lapu9g00981 529 Pfam CBS domain 280 329 IPR000644 -
Lapu9g00981 529 ProSiteProfiles CBS domain profile. 116 174 IPR000644 -
Lapu9g00981 529 MobiDBLite consensus disorder prediction 360 383 - -
Lapu9g00981 529 Gene3D - 191 345 IPR046342 -
Lapu9g00981 529 Gene3D - 27 181 IPR046342 -
Lapu9g00981 529 SUPERFAMILY CBS-domain pair 221 333 IPR046342 -
Lapu9g00981 529 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 22 469 - -
Lapu9g00981 529 CDD CBS_pair_MUG70_1 51 167 - -
Lapu9g00981 529 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00981 Lapu-Chr9 15428055 15433700 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00981 - - gmx:100785816 865.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00981 9 15428055 15433700 Lapu9g00981 9 15428055 15433700 ECH
Lapu9g00981 9 15428055 15433700 Lapu3g03555 3 58997843 59004167 PCT