LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu9g00976	ATGGGGGAGGAGGAGAAGAAACCAGAGGAACCCCAGGCCGAGGAGAAGAAACCAGAGGAACCCCAAAAGAAAGAGGAGGAGAAGAAGGAAGAAACAGCCGAAAAACCAGCAGGAGAGACAAAACCTGAAGAGGAGAAGAAGGAAGAAGTGACTCCTCCACCGCCACCGCCCCAGATTGTGCTCAAAGTGTTCATGCATTGCGAGGGTTGCGCTCGCAAGGTTCGTCGCTCCCTCAAAGGATTTCCAGGTGTGGAAGGTGTGGTCACCGATTGCAAATCTCACATGGTGGTTGTCAAGGGAGAGAAGGCGGATCCTCTGAAGGTTTTGGAGAGGATACAGAAGAAGAGTCACAGACAGGTGGAGCTTCTCTCTCCCATCCCGAAACCTCCTGAGGAGAAGAAGGTCCCCGAAGAAGAAAAACCAAAGCCCAAGCTGGAAGAGAAAGTTGAAGAGCCTCCGATTGTGACGCTTCTGAAAGTTCACATGCATTGCGAAGCTTGTTCACAGGAAATCAAGAGACGCATACTGAGAATGAAGGGAGTGGAATCAGCTGAATCTGATCTGAAGAACTCAGTAGTGAGCGTGAAGGGCGTGTATGATCCTGAGAAGTTGGTTGAGTACGTGTACAAGAGAACTGGGAAGCAGGCAGTGATCGTGAAGCAAGAGGCAGAAAAGGAAGAGAAGGTGGAGGAAGCCAAAGAAGCAAAGGAGGAGAAAAAGGAGGAGGAGGGTGAGAAAGAGAAGAAGAGCGGTGAAGGAGAAGAAAACATGGAAAAGAAAGAGGAAGAAGCAAAGGGTGAGACCAAAGCAGAGGAAGCAGTGGCAGTAGTAGCAGCAGCAGCATCTAGTGAAGACAACAACAAGGTTGTTCCAGAGGTGAAGATTAATGAATACTTCTATAACCCACCAAGGTATGGCATGGAGGTGTATGCATATCCTGCGCACCCTGTACACCCTACATTCCCTGCGTATTACCATGGCTACCCTCCCCAGATCTTCAGCGATGAGAACCCAAATGCCTGCACTGTCATGTAA	1035	0.4957	MGEEEKKPEEPQAEEKKPEEPQKKEEEKKEETAEKPAGETKPEEEKKEEVTPPPPPPQIVLKVFMHCEGCARKVRRSLKGFPGVEGVVTDCKSHMVVVKGEKADPLKVLERIQKKSHRQVELLSPIPKPPEEKKVPEEEKPKPKLEEKVEEPPIVTLLKVHMHCEACSQEIKRRILRMKGVESAESDLKNSVVSVKGVYDPEKLVEYVYKRTGKQAVIVKQEAEKEEKVEEAKEAKEEKKEEEGEKEKKSGEGEENMEKKEEEAKGETKAEEAVAVVAAAASSEDNNKVVPEVKINEYFYNPPRYGMEVYAYPAHPVHPTFPAYYHGYPPQIFSDENPNACTVM*	345

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu9g00976	344	ProSiteProfiles	Heavy-metal-associated domain profile.	56	120	IPR006121	GO:0046872
	Lapu9g00976	344	SUPERFAMILY	HMA, heavy metal-associated domain	155	218	IPR036163	GO:0046872
	Lapu9g00976	344	SUPERFAMILY	HMA, heavy metal-associated domain	59	115	IPR036163	GO:0046872
	Lapu9g00976	344	PANTHER	HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7	39	344	IPR044577	GO:0046872
	Lapu9g00976	344	MobiDBLite	consensus disorder prediction	127	147	-	-
	Lapu9g00976	344	Coils	Coil	218	252	-	-
	Lapu9g00976	344	MobiDBLite	consensus disorder prediction	221	272	-	-
	Lapu9g00976	344	MobiDBLite	consensus disorder prediction	1	51	-	-
	Lapu9g00976	344	MobiDBLite	consensus disorder prediction	119	147	-	-
	Lapu9g00976	344	CDD	HMA	65	121	IPR006121	GO:0046872
	Lapu9g00976	344	MobiDBLite	consensus disorder prediction	221	270	-	-
	Lapu9g00976	344	Pfam	Heavy-metal-associated domain	159	213	IPR006121	GO:0046872
	Lapu9g00976	344	Pfam	Heavy-metal-associated domain	61	115	IPR006121	GO:0046872
	Lapu9g00976	344	CDD	HMA	158	216	IPR006121	GO:0046872
	Lapu9g00976	344	MobiDBLite	consensus disorder prediction	1	57	-	-
	Lapu9g00976	344	Gene3D	-	154	219	-	-
	Lapu9g00976	344	ProSiteProfiles	Heavy-metal-associated domain profile.	153	217	IPR006121	GO:0046872
	Lapu9g00976	344	Gene3D	-	57	128	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu9g00976	Lapu-Chr9	15279563	15281923	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu9g00976	-		-	twl:119985324	270.011

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lapu9g00976	9	15279563	15281923	Lapu9g00976	9	15279563	15281923	ECH
	Lapu3g03548	3	58938833	58940895	Lapu9g00976	9	15279563	15281923	PCT