Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00946 ATGGTGTTCCTTGCTCCATTACCAACTTTTTATCAAATCTACAAGAAGAAATCTACCGAAGGGTTTCAATCACTACCTTATATCGTTGCACTGTTCAGTTCGATGCTCTGGATTTATTACGCACTCGTAAAAAGGGAGGGTACCCTCCTTCTGATCACTATTAACTCCTTTGGATGTGTGATAGAGACAATCTACCTTGCCATCTTCATAGTTTACGCACCTAATAAAATCAGGCTTTCTACCATCAAGTTTCTTCTCTTGCTGAATGTTGTTGGGTTCGGAGCGATGCTTCTTTTAACACTATTCCTAACAACAGGATCCAAACGTCTTTCTGTCATTGGATGGATTTCTCTCGTTTTCAACATAAGTGTATTTGCTGCTCCTCTCTGCATTATGAAACGTGTGATAAAGACGAAAAGTGTGGAATTCATGCCTTTAAGTTTGTCCTTCTTTTTGACCTTAAATGCAATCATGTGGTTCTTCTATGGCCTTCTCCTCAACGACTACTACATCGCTCTCCCAAATACACTGGGTTTTCTATTCGGCATAATTCAGATGGTGATGTATTTGATTTATAGAAAAGCCAAGACAAATGAGCCAACGAAATTGCCAGAACTAAACGGTCATGAGATTATTGAAGTTGGGAAGATGAGCACAATGGTACCCTCTGAGCCTAGTCATGTAACCAGTGGTGCTGTTACTGAGATTGCTATTGAGGATCCAAATGGAAAAGAAGGACATGGAAACCTGATGAACATCATGGATTCCCATAGCAATGTGTGA 783 0.401 MVFLAPLPTFYQIYKKKSTEGFQSLPYIVALFSSMLWIYYALVKREGTLLLITINSFGCVIETIYLAIFIVYAPNKIRLSTIKFLLLLNVVGFGAMLLLTLFLTTGSKRLSVIGWISLVFNISVFAAPLCIMKRVIKTKSVEFMPLSLSFFLTLNAIMWFFYGLLLNDYYIALPNTLGFLFGIIQMVMYLIYRKAKTNEPTKLPELNGHEIIEVGKMSTMVPSEPSHVTSGAVTEIAIEDPNGKEGHGNLMNIMDSHSNV* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00946 260 FunFam Bidirectional sugar transporter SWEET 1 78 - -
Lapu9g00946 260 Gene3D - 107 202 - -
Lapu9g00946 260 FunFam Bidirectional sugar transporter SWEET 109 201 - -
Lapu9g00946 260 Pfam Sugar efflux transporter for intercellular exchange 1 76 IPR004316 GO:0016020
Lapu9g00946 260 Pfam Sugar efflux transporter for intercellular exchange 112 196 IPR004316 GO:0016020
Lapu9g00946 260 Gene3D - 1 76 - -
Lapu9g00946 260 PANTHER RAG1-ACTIVATING PROTEIN 1 1 202 IPR047664 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00946 Lapu-Chr9 14660018 14667282 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00946 2 221 Miscellaneous Gene Families AT5G50790 54.911 1.97e-87 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00946 K15382 - gmx:100794434 417.927
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00946 9 14660018 14667282 Lapu9g00946 9 14660018 14667282 ECH
Lapu3g03530 3 58694194 58696196 Lapu9g00946 9 14660018 14667282 PCT