Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03530 ATGGCTAACGATGCCCCTATGGTTTTTGCTGTTGGAATTTTAGGTAACTTAGTCTCCTTCTGTTGCTTTCTTGCACCAGTACCAACATTTTATCGTGTTTGTAAGAAGAAAACCACCGAAGGTTTCCAATCACTTCCTTACGTGGCTGCACTCTTTACTTCAATGCTTTGGATTTTTTATGCTTACATAAAGACAGGAGAAATACTTCTTATCACCATCAACGCATTTGGTTGTTTCATAGAGACAGTTTACCTTGTCATCTATATAACTTATTGTCCAAAGAAAGCTAGGTATTTTACCTTCAAGATGATTTTCTTGTTCAACGTTGGAGTAATTTTCTTGGTTGTTCTTCTTACTCACGTTCTAGCAAAAGAACGAACAGCCCGTATTGAGCTTCTTGGATGGATTTGTGTAGTTCTTTCTACCAGTGTGTTTGCAGCACCTTTGAGCATCATTAAAGTGGTTATTCGCACCAAAAGTGTTGAGTTCATGCCCATTACTCTGTCACTCCTTCTCACAGTGAGTGCAATTATGTGGTTGGCGTACGGTATTCTCCTGAGGGACATCTATGTTACACTTCCGAACTTTGTGGGTATCACATTTGGAACAATTCAGATAGTGCTTTATTTTATATACAGAAAGAACAAGCCTGTTAAGGATCAAAAGCTGCCAGAACACAAAGACAATGTTACGAATGAAGAAAACGCCAACACAACTGTGAGTAGTGAGAATCAGGGAGCAAACACTGCTGGATTTGTTGACATTGAGATTGGAGAGAAGAAGGAAGTGAAGAAAGTTCAAGAAAAAGAGAAAAAACAGGACCAAGTTGGTAATTCTCGTGACCAAACAGAACAGAACAACAATAGCAACAAAACAAGGGAGGGTAGCACTCAACTACAACAACACAAGGAGGGTTGA 918 0.3932 MANDAPMVFAVGILGNLVSFCCFLAPVPTFYRVCKKKTTEGFQSLPYVAALFTSMLWIFYAYIKTGEILLITINAFGCFIETVYLVIYITYCPKKARYFTFKMIFLFNVGVIFLVVLLTHVLAKERTARIELLGWICVVLSTSVFAAPLSIIKVVIRTKSVEFMPITLSLLLTVSAIMWLAYGILLRDIYVTLPNFVGITFGTIQIVLYFIYRKNKPVKDQKLPEHKDNVTNEENANTTVSSENQGANTAGFVDIEIGEKKEVKKVQEKEKKQDQVGNSRDQTEQNNNSNKTREGSTQLQQHKEG* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03530 305 MobiDBLite consensus disorder prediction 255 278 - -
Lapu3g03530 305 FunFam Bidirectional sugar transporter SWEET 129 221 - -
Lapu3g03530 305 Gene3D - 128 223 - -
Lapu3g03530 305 Pfam Sugar efflux transporter for intercellular exchange 10 96 IPR004316 GO:0016020
Lapu3g03530 305 Pfam Sugar efflux transporter for intercellular exchange 132 216 IPR004316 GO:0016020
Lapu3g03530 305 MobiDBLite consensus disorder prediction 279 296 - -
Lapu3g03530 305 Gene3D - 10 98 - -
Lapu3g03530 305 FunFam Bidirectional sugar transporter SWEET 9 97 - -
Lapu3g03530 305 PANTHER RAG1-ACTIVATING PROTEIN 1 17 243 IPR047664 -
Lapu3g03530 305 MobiDBLite consensus disorder prediction 233 249 - -
Lapu3g03530 305 MobiDBLite consensus disorder prediction 221 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03530 Lapu-Chr3 58694194 58696196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03530 9 225 Miscellaneous Gene Families AT5G23660 55.111 6.04e-84 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03530 K15382 - gmx:100801430 511.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03530 3 58694194 58696196 Lapu9g00946 9 14660018 14667282 PCT