Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00915 ATGGAGCAAAACGACGAGAACGGAGGCAGCACGAGCAGAGAGGAACAGGAAGAGGCATTGGTCGCTTTGATCGAACACCGAACCCACGAAGTCAAAAACCTCCGTCACCGCATCGCCTATTACAAAACCCAGCTTGATGAAGCGGAGAAAAGGTTGCAAGATTCTGAATCCAAATTGGCTCGCCTTCGAGGTCAGAGTAATGCATTGTCATCCCGAAATAACTTAGATGATGGGATTAAAACTGTGAAGACAGAGCGCAGATCAAACAGCCCCATTGATAGAAATGAAGGTTCTATAAAAAACCGACATCAATCTAAACCAGAACTTCTTATTCCTTCAGTGAATCCAAAAGTTTCACAACCTGTATTGTTGCCGAAGTCTTCTTCAAAAGCTTCTATAAGTTCCAGTTCTGAAGTCGCTCCTGGAATCCATAATTCTCCAATCACTGGTGATAGCTCTAGGGGAAAATCTGACAAGTCCCATAGTCATAGACTTTCTTCTGAGCAGCAAAAAACTGAAATCAAGGACAAAGGGACAAAAAGGAAATTTGAACAAAAAGAACACAAGGAATTGATTCCTTTAATACGCAAGAGTTCTTCACCAAGCTTAGTACACTGTCAAACGAGCAACCACATCTCAAGTCAACACAAGAGGAAATTGCGGAGTATTGCTTTGTGCCCTGTGAATGATCAGCTTTTCGTGACCAGTGCTCTGGATGGAATGGTCAACTTCTGGCAAATTCAGGCTAAGGGAGCAGGAGCCTCCCGTCTTAGCACCACTGATTGTGCATCCCAAAAGCATAGGAGATGGCCCGAAGATTTAGTTTGGCACCCAGAAGGAAACAGCCTATTTGCAGTATACAGTGCTGATGGTGGGGATTCTCAAGTATCGATTACAAATCTGAATAAAGGACAACAAGGGGGAGAACGTGTAAAGTTCTTAGAGGACAAGCCTCATGTTAAAGGAATTATCAATGGCATTGTTTTTATGCCATGGGAAAATACATGTTTTGTAACTGGTGGAAGTGACCATGCTGTTGTACTTTGGAGTGAGCATGAGGGTGAGAAGTGGAAACCAAAGGCATTGCATAGGAATCTTCACTCATCTGCTGTCATGGGAGTTGCCGGTATGCAGCATAAGCAGATGGTGTTATCTGTTGGTGCAGATAGGAGAATATTTGGGTATGATGTTCGTGTAGGAAGAGCAGATTTCAAGCATCAGGTTGATAGTAAATGCATGAGTGTCCTGCCTAATCCATGTGACTTCAATTTATTCATGGTTCAAACAGGGACCCATGAGAGGCAGCTTCGGTTGTTTGATATTAGACTGAGGAATACAGAACTTCATGCTTTTGGATGGAAGCAAGAAAGCAGTGATTCTCAATCGGCTCTGATAAATCAGTCTTGGTCTCCTGATGGACTATATATAACATCTGGTTCTGCAGATCCTGTGATTCACATATTTGATATAAGGTATACTGCTCACAAGCCTTCCCAATCTATAAGAGCACATCAGAAACGAGTCTTCAGAGCCATGTGGCTTCAGTCCATTCCTCTTGTGATTTCCATATCATCCGATCTCAACATTGGACTGCACAAGGTTTATGCATGA 1611 0.4295 MEQNDENGGSTSREEQEEALVALIEHRTHEVKNLRHRIAYYKTQLDEAEKRLQDSESKLARLRGQSNALSSRNNLDDGIKTVKTERRSNSPIDRNEGSIKNRHQSKPELLIPSVNPKVSQPVLLPKSSSKASISSSSEVAPGIHNSPITGDSSRGKSDKSHSHRLSSEQQKTEIKDKGTKRKFEQKEHKELIPLIRKSSSPSLVHCQTSNHISSQHKRKLRSIALCPVNDQLFVTSALDGMVNFWQIQAKGAGASRLSTTDCASQKHRRWPEDLVWHPEGNSLFAVYSADGGDSQVSITNLNKGQQGGERVKFLEDKPHVKGIINGIVFMPWENTCFVTGGSDHAVVLWSEHEGEKWKPKALHRNLHSSAVMGVAGMQHKQMVLSVGADRRIFGYDVRVGRADFKHQVDSKCMSVLPNPCDFNLFMVQTGTHERQLRLFDIRLRNTELHAFGWKQESSDSQSALINQSWSPDGLYITSGSADPVIHIFDIRYTAHKPSQSIRAHQKRVFRAMWLQSIPLVISISSDLNIGLHKVYA* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00915 536 PANTHER TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN 4 534 - -
Lapu9g00915 536 Coils Coil 31 72 - -
Lapu9g00915 536 Gene3D - 127 418 IPR015943 GO:0005515
Lapu9g00915 536 MobiDBLite consensus disorder prediction 154 186 - -
Lapu9g00915 536 MobiDBLite consensus disorder prediction 62 186 - -
Lapu9g00915 536 MobiDBLite consensus disorder prediction 62 77 - -
Lapu9g00915 536 Pfam WD domain, G-beta repeat 466 489 IPR001680 GO:0005515
Lapu9g00915 536 MobiDBLite consensus disorder prediction 120 153 - -
Lapu9g00915 536 Gene3D - 419 535 IPR015943 GO:0005515
Lapu9g00915 536 MobiDBLite consensus disorder prediction 78 103 - -
Lapu9g00915 536 SUPERFAMILY WD40 repeat-like 218 531 IPR036322 GO:0005515
Lapu9g00915 536 SMART WD40_4 356 396 IPR001680 GO:0005515
Lapu9g00915 536 SMART WD40_4 494 533 IPR001680 GO:0005515
Lapu9g00915 536 SMART WD40_4 307 350 IPR001680 GO:0005515
Lapu9g00915 536 SMART WD40_4 258 300 IPR001680 GO:0005515
Lapu9g00915 536 SMART WD40_4 452 489 IPR001680 GO:0005515
Lapu9g00915 536 SMART WD40_4 200 246 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00915 Lapu-Chr9 13740905 13746496 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00915 - - gmx:100799587 993.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00915 9 13740905 13746496 Lapu9g00915 9 13740905 13746496 ECH
Lapu3g03509 3 58435190 58438560 Lapu9g00915 9 13740905 13746496 PCT