Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00849 ATGAGCGTGCACTTCCACTACTACCCTTTCCCAGCCTTGGCTTATGGTTGCAGCTATTACGCTTCTTATGCAACAAAACCCACTCTCTCCAACCGCCGTCGCATTCCGCCTCACTCTTCCACCTTCTCTGCCGTCACCAATCTCTTCTTCCAATACCCTAATTTCCTCACGGGGAACACTCTCTTCCTTAGGATGCAGTGCTCTCTTACCAAGAGGAAAAAGCAAAGAGAAATGTCTTTTACATTGCAGCGATTTTGCTCTGTGCGTGACATGAGTAAGAACAAAGCGATGGTGGAGAGGTTGCAGCGCTATGGAGTGGTCACATCAAGTAAAGTGGCTGAAGTAATAGAGACAGTTGACAGAGCGTTGTTTGTACCTGATGGAGCTGCGCCTTACGATGACAGCCCCATGGCCATAGGGTACAATGCCACTATATCTGCCCCGCATATGCATGCCATGTGTCTTCAGTTGCTCGAGGAGAATTTGCAGCCTGGGATGCATGCTCTGGACGTTGGCTCTGGAACGGGGTACCTGACTGCGTGCTTTGCCTTGATGGTTGGACCCCTAGGCCGTGCTGTTGGTATAGAGCATATTCCTGAATTGGTTTCTTTTTCAATAGAGAATATTCAGAAAAGTGCTGCAGCTACACAATTGAAAGATGGTTCCCTTTCTGTTCATGCTGGTGATGGGAGGCAAGGTTGGCCAGAGTCAGCACTTTATGATGCCATTCACGTTGGTGCAGCAGCGCCAGAAATTCCCCAACCACTTATTGACCAGTTGAAGCCTGGAGGTAGAATGGTGATTCCTGTTGGAAACATATTTCAGGATTTAAAGGTGGTGGATAAGAATTCTGATGGTTCTATCAGTGTCCGCACTGAGACGTCTGTTCGATATGTTCCCCTCACTAGTCGAGAAGCTCAACTGCGAGGTTACTGA 936 0.4829 MSVHFHYYPFPALAYGCSYYASYATKPTLSNRRRIPPHSSTFSAVTNLFFQYPNFLTGNTLFLRMQCSLTKRKKQREMSFTLQRFCSVRDMSKNKAMVERLQRYGVVTSSKVAEVIETVDRALFVPDGAAPYDDSPMAIGYNATISAPHMHAMCLQLLEENLQPGMHALDVGSGTGYLTACFALMVGPLGRAVGIEHIPELVSFSIENIQKSAAATQLKDGSLSVHAGDGRQGWPESALYDAIHVGAAAPEIPQPLIDQLKPGGRMVIPVGNIFQDLKVVDKNSDGSISVRTETSVRYVPLTSREAQLRGY* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00849 311 Gene3D Vaccinia Virus protein VP39 88 311 IPR029063 -
Lapu9g00849 311 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 84 309 IPR000682 GO:0004719|GO:0036211
Lapu9g00849 311 FunFam Protein-L-isoaspartate O-methyltransferase 87 311 - -
Lapu9g00849 311 ProSitePatterns Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 228 243 IPR000682 GO:0004719|GO:0036211
Lapu9g00849 311 NCBIfam protein-L-isoaspartate O-methyltransferase 92 307 IPR000682 GO:0004719|GO:0036211
Lapu9g00849 311 CDD AdoMet_MTases 169 270 - -
Lapu9g00849 311 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 94 279 IPR029063 -
Lapu9g00849 311 Pfam Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 93 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00849 Lapu-Chr9 12682194 12684688 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00849 K00573 - gmx:100810913 516.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00849 9 12682194 12684688 Lapu9g00849 9 12682194 12684688 ECH
Lapu3g01184 3 12764823 12767285 Lapu9g00849 9 12682194 12684688 PCT