Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01184 ATGGAGCAATACTGGTCTGGGAGTGCCCTGAACGAGAACAAAGGAATGGTAGATAATTTGCAGCGTTATGGAATTATTACTTCCAGAAGGGTAGGTGAAGTAATGGAGACCATTGATAGAGCTTTGTTTGTACCTGGTGGACTTCAACCTTATGTTGACAGTCCTATGCCGATAGGCTACAATGCTACTATATCTGCGCCACATATGCATGCAACGTGCCTTCAGTTGCTGGAGAAGAATTTGCAACCTGGGATGCGTGCTCTGGACGTTGGCTCTGGAACGGGATACCTGACTGGATGCTTTGCCTTGATGGTAGGACCCGAAGGCCGTGCTGTTGGCGTGGAACATATTCCTGAATTGGTTTCTTTTTCAATTGAGAATATTAAAAAAAGTGCTGCAGCTCAACCATTGAAAGATGGTTCCCTTTCTGTGCATGGTGGTGATGGGAGGCAAGGTTGGCCTGATTTTGCTCCTTATGATGCCATTCATGTTGGAGCAGCGGCACCCGAAATTCCCCAACCACTTATTGACCAGTTGAAGCCGGGTGGTAGAATGGTTATTCCTGTTGGAAACGTATTTCAAGATTTAAAGGTCGTGGATAAGAACTCTGATGGTTCTATCAGTATCCGGACTGAGACTTCTGTTCGGTATGTGCCTCTCACTAGCAGAGAAGCTCAGTTGCGTGGTTAG 690 0.4638 MEQYWSGSALNENKGMVDNLQRYGIITSRRVGEVMETIDRALFVPGGLQPYVDSPMPIGYNATISAPHMHATCLQLLEKNLQPGMRALDVGSGTGYLTGCFALMVGPEGRAVGVEHIPELVSFSIENIKKSAAAQPLKDGSLSVHGGDGRQGWPDFAPYDAIHVGAAAPEIPQPLIDQLKPGGRMVIPVGNVFQDLKVVDKNSDGSISIRTETSVRYVPLTSREAQLRG* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01184 229 ProSitePatterns Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 147 162 IPR000682 GO:0004719|GO:0036211
Lapu3g01184 229 FunFam Protein-L-isoaspartate O-methyltransferase 4 229 - -
Lapu3g01184 229 Pfam Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 12 224 - -
Lapu3g01184 229 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 5 227 IPR000682 GO:0004719|GO:0036211
Lapu3g01184 229 NCBIfam protein-L-isoaspartate O-methyltransferase 12 226 IPR000682 GO:0004719|GO:0036211
Lapu3g01184 229 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 13 197 IPR029063 -
Lapu3g01184 229 CDD AdoMet_MTases 86 189 - -
Lapu3g01184 229 Gene3D Vaccinia Virus protein VP39 5 229 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01184 Lapu-Chr3 12764823 12767285 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01184 K00573 - gmx:100527082 440.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01184 3 12764823 12767285 Lapu3g01184 3 12764823 12767285 ECH
Lapu3g01184 3 12764823 12767285 Lapu9g00849 9 12682194 12684688 PCT