Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00735 ATGGAAGACTTGAAGATGTCAGGAATTGTTACGAACGGGGTTCATGTTGAAGGGGAAGGTAATGAGATGAATGGGAACCGTGATTCCCCATCTAAGGAAAACTTGAGTCTGGTTAAGTCCCCTAGGGGTTCCTCGAGTCCGAGAAAAGGTGAAGGGGATGCTGCTAATTTTGGTGTTGATGGGGTGGTTGAGCCCTCCATTGAACAGCTTTATGAGAATGTGTGTGACATGCAGAGTTCGGATCAGTCACCCTCAAGGCAAAGTTTTGGATCTGATGGCGATGAGTCTAGAATTGATTCGGAGTTGCGCCATCTAGTTGGAGGACGGATGAGGGAGGTAGAAATAATGGAAGAGGAAGTTGGGGAGGGGAAAGGGCAAGAAAGGAGTTCAAGTAGCGAAATATCTTCTGGATTAGATGGCTTGTCCAATGATAAGAAGTTGGATCAGGTGAATGAGAATCAAGAGGATCAGCCTGCAGCTACTAGTTCTGATTCCTCAGGAAAATCTGTTAAAGCATCGAGTTCACGGGTGGGACCTGATACTTCGCCCAAATCAACAGCCAAGGGAAAAAGTCCTCTCCCAAAAGCTCCTGTCGAAAAAAAGAATAGTAGGCCTTTGAGGAAACAAAGCAGTGGTGTTACTGGCGTGAAGAATTTGAAGAATTCTCCTTTGGGAAATAAGTCAGTTTCTCGAAACCGTATTGAGAAAAAGACTGAGTCGGTATTAGAGAGACCTGAGAGGGCACCGTTATTACTAAAACAAGCTAGAGATATGATTTCATTCGGGGATAATCCACATAAGGCTCTTGACTTAGCTCTTCAAGCAATGAAACTGTATGAGAAGTTAGGTGATGGGAAACCGAGTTTGGAGCTGGTTATGTGTTTACATGTTACAGCAGCAATATATTGTAGCTTGGGTCAATATGGTGAGGCAATTCCACTTCTTGAGCGCTCAATTGAGATTCCTGTTATTGAGGAAAGTCAAGAACATGCCCTTGCTAAATTTGCTGGTCACATGCAACTGGGAGACACCTATGCTATGCTGGGCCAGCTTGAGAATTCCATTGCGTGCTATACCACTGGATTAGAAGTCCAGAAGCAGGTTTTGGGAGAAACAGACCCAAGGGTTGGCGAAACTTGTCGGTATGTGGCTGAAGCTAATGTTCAAGCTCTGCAATTTGATGAAGCAGAGAGGCTTTGTCAGATGGCTCTAGACATTCATAAAGCAAATAATTCAGCTCCATCTCTTGAAGAGGCAGCTGATAGGAGGCTCATGGGCCTTGTATGTGATACAAAGGGAAATCACGAAGCTGCTCTTGAGCATCTTGTTCTAGCCAGCATGGCAATGGTAGCAAACGGCCAGGAAGGAGATGTGGCTTCTGTTGACTGCAGCATTGGAGACACATACTTGTCTCTGTCTCGATATGATGAAGCTGTCTTTGCATATCAGAAAGCATTAACAGCTTTCAAGACCAACAAAGGAGAGAATCATCCAGCAGTGGGATTTGTCTTCGTACGTTTGGCTGATTTGTATAACAGGATAGGGAAGATAAGGGAATCAAAATCATATTGTGAGAGTGCACTTAAAATATACGAGAATCCAATTCCTGGAGTTCCTCCAGAAGAGATTGCTAGTGGTCTTACAAATATTTCAACTATCTACGAGTCTATGAATGAGCTTGAAGGGGCACTCAAGTTACTGCAGAAAGCACTGGAGATATACAATGATGCCCCTGGTCAGCAAAGCACAATAGCTGGAATTGAAGCTCAGATGGGAGTCATGTACTACATGTTGGGGAACTATTCTGAGTCTTATGAAACTTTGAAGAATGCTATTTCAAAGCTTCGTGCTATTGGAGAAAAGAAATCATCTTTCTTTGGTATTGCTCTTAATCAAATGGGACTTGCCTGTGTGCAGCGGTATGCCTTAAGTGAGGCTACAGAATTATTTGAAGAAGCAAAGAGTATTTTGGAACAACAATATGGTCCGTACCACCCGGAAACACTTGGGGTGTGTAGTAACCTTGCTGGCACATACGATGCAATTGGCAGGCTGGATGATGCGATTCAAATTCTGGAGTACGTTGTTAGCATGAGGGAGGAAAAGCTTGGGACAGCAAATCCTGACGTGGATGATGAGAAGAAAAGGTTGGGTGAGTTGTTGAAGGAGGCAGGTAGAGTTCGGAGCAAAAAAACCAGGTCACTTGAGAACCTTCTTGATGGCAATGCTCACACTGTAAACAATGTTGTCATCAGGGCCTGA 2262 0.4408 MEDLKMSGIVTNGVHVEGEGNEMNGNRDSPSKENLSLVKSPRGSSSPRKGEGDAANFGVDGVVEPSIEQLYENVCDMQSSDQSPSRQSFGSDGDESRIDSELRHLVGGRMREVEIMEEEVGEGKGQERSSSSEISSGLDGLSNDKKLDQVNENQEDQPAATSSDSSGKSVKASSSRVGPDTSPKSTAKGKSPLPKAPVEKKNSRPLRKQSSGVTGVKNLKNSPLGNKSVSRNRIEKKTESVLERPERAPLLLKQARDMISFGDNPHKALDLALQAMKLYEKLGDGKPSLELVMCLHVTAAIYCSLGQYGEAIPLLERSIEIPVIEESQEHALAKFAGHMQLGDTYAMLGQLENSIACYTTGLEVQKQVLGETDPRVGETCRYVAEANVQALQFDEAERLCQMALDIHKANNSAPSLEEAADRRLMGLVCDTKGNHEAALEHLVLASMAMVANGQEGDVASVDCSIGDTYLSLSRYDEAVFAYQKALTAFKTNKGENHPAVGFVFVRLADLYNRIGKIRESKSYCESALKIYENPIPGVPPEEIASGLTNISTIYESMNELEGALKLLQKALEIYNDAPGQQSTIAGIEAQMGVMYYMLGNYSESYETLKNAISKLRAIGEKKSSFFGIALNQMGLACVQRYALSEATELFEEAKSILEQQYGPYHPETLGVCSNLAGTYDAIGRLDDAIQILEYVVSMREEKLGTANPDVDDEKKRLGELLKEAGRVRSKKTRSLENLLDGNAHTVNNVVIRA* 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00735 753 Gene3D Tetratricopeptide repeat domain 232 446 IPR011990 GO:0005515
Lapu9g00735 753 MobiDBLite consensus disorder prediction 1 241 - -
Lapu9g00735 753 MobiDBLite consensus disorder prediction 207 229 - -
Lapu9g00735 753 ProSiteProfiles TPR repeat profile. 459 492 IPR019734 GO:0005515
Lapu9g00735 753 Gene3D Tetratricopeptide repeat domain 625 736 IPR011990 GO:0005515
Lapu9g00735 753 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 56 743 - -
Lapu9g00735 753 Coils Coil 557 577 - -
Lapu9g00735 753 Gene3D Tetratricopeptide repeat domain 447 624 IPR011990 GO:0005515
Lapu9g00735 753 ProSiteProfiles TPR repeat profile. 544 577 IPR019734 GO:0005515
Lapu9g00735 753 MobiDBLite consensus disorder prediction 92 126 - -
Lapu9g00735 753 Pfam Tetratricopeptide repeat 339 366 IPR019734 GO:0005515
Lapu9g00735 753 Pfam Tetratricopeptide repeat 544 577 - -
Lapu9g00735 753 Pfam Tetratricopeptide repeat 628 700 - -
Lapu9g00735 753 Pfam Tetratricopeptide repeat 457 533 - -
Lapu9g00735 753 SMART tpr_5 335 368 IPR019734 GO:0005515
Lapu9g00735 753 SMART tpr_5 501 534 IPR019734 GO:0005515
Lapu9g00735 753 SMART tpr_5 377 410 IPR019734 GO:0005515
Lapu9g00735 753 SMART tpr_5 627 660 IPR019734 GO:0005515
Lapu9g00735 753 SMART tpr_5 292 325 IPR019734 GO:0005515
Lapu9g00735 753 SMART tpr_5 585 618 IPR019734 GO:0005515
Lapu9g00735 753 SMART tpr_5 459 492 IPR019734 GO:0005515
Lapu9g00735 753 SMART tpr_5 669 702 IPR019734 GO:0005515
Lapu9g00735 753 SMART tpr_5 544 577 IPR019734 GO:0005515
Lapu9g00735 753 MobiDBLite consensus disorder prediction 153 188 - -
Lapu9g00735 753 MobiDBLite consensus disorder prediction 24 43 - -
Lapu9g00735 753 SUPERFAMILY TPR-like 273 705 IPR011990 GO:0005515
Lapu9g00735 753 MobiDBLite consensus disorder prediction 72 91 - -
Lapu9g00735 753 Pfam Tetratricopeptide repeat 299 322 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00735 Lapu-Chr9 9667459 9671790 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00735 - - gmx:100783201 1216.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01115 3 12037345 12040336 Lapu9g00735 9 9667459 9671790 ECH
Lapu9g00735 9 9667459 9671790 Lapu9g00735 9 9667459 9671790 ECH
Lapu3g01115 3 12037345 12040336 Lapu9g00735 9 9667459 9671790 PCT