Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00728 ATGGCTGGTATTGTAGAAAAGGAACAGCAACAAAACCAAGTTATTGGAATTATCGAAAAAGAGAAATTGCAGAAGCAGGAGAGTGAGAACAACAATAGCATCACACGCACGCAATTGGAGAGTGGTGAAGGGGAAAGAGAGATGGCTCCTACGCCTGCCAATTCCATGCACAGGTCGGGTTCGAGGCCTCAACTTGATGTGAGCAAAGCTGAGATTCAAGGGAATGAGGAGGAGAAGTATCCCACCATTTTGTTGCCTAATCAATCTGATGATTTGTCTCACCTAGCACTTGATATTGGAGGATCTCTAATAAAGTTGGTGTACTTTTCAAGACATGAAGACCAATCAGTGGATGATAAAAGGAAAAGAAGTGTGAAAGAGCGGCTGGGGTTTTCTAATGGTAACAGGAGAAGCTACCCTATTCTTGGTGGAAGGTTACACTTTGTGAAGTTTGAAACGAGAAAGATTAATGAGTGCTTGGATTTCATTCATTCGAAGCAGCTTCACTGTGGGGGGTTGGAGTCACGTTACTCTGATGGTGTGACTGACCAGAATGGCATAATTAAGGCTACTGGTGGTGGAGCATACAAGTATGCTGACCTTTTCAAAGAAAGACTTGGGGTTAGTCTTGACAAAGAAGATGAAATGGATTGTCTTGTGGCTGGAGCTAACTTCTTGCTTAAGGCAATTCGTCATGAAGCTTTCACACACATGGAGGGCCACAAAGAGTTTGTTCAAATTGAACCTAATGACTTATTCCCTTATCTTCTGGTTAATATTGGATCTGGTGTTAGTATGATTAAGGTTGATGGAGATGGGAAATTTGAGAGGGTTAGTGGGACAAATGTCGGGGGTGGTACTTATTGGGGCTTGGGAAGACTGTTAACAAAGTGCAAGAGTTTTGATGAGTTGCTTGAGCTGAGTCAGAAAGGAGATAATAGAAGTATGGACATGCTAGTTGGGGACATTTACGGAGGTTTGGACTATTCGAAGATTGGCCTATCAGCTTCCACTATTGCCTCAAGTTTTGGCAAAACAATATCAGAAAAAAAGGAGCTTGAAGAATACAGACCAGAAGATATATCACTTTCTCTTCTAAGGATGATTTCGTACAATATTGGCCAGATAGCTTACTTGAATGCATTGCGATTTCGGTTGAAGCGAATCTTTTTTGGTGGATTTTTTATAAGGGGTCATGCCTATACCATGGACACTATTTCTTTTGCTGTACATTTCTGGTCTAATGGAGAAGCACAAGCAATGTTCTTGCGACATGAAGGATTTTTGGGAGCTTTAGGTGCATTTATGAGTTATGAGAAGCATGGTTTAGATGACCTCATGGTTCATCAGTTGGTGGAAAGGTTTCCAATGGGTGCTCCATATACAGGAGGCAAGATTCATGGCCCTCCACTTGGAGATTTAAATGAGAAGATTTCGTGGATGGAGAAGTTTTTGCAGAAGGGAACTGAGATTACTGCACCTGTGCCAATGACTCCACTTGCTGGAACTACTGGTCTTGGGGGTTTTGAGGTTCCTTTGTCAAAAGGAAGTACTCTGCGATCTGATGCTAGTGCTCTAAATGTTGGTGTTCTCCATCTAGTACCAACACTGGAGGTGTTCCCATTACTAGCAGACCCAAAATTGTATGAGCCAAATACAATTGACCTATCAGATAACAGTGAACTAGAATATTGGCTCACCATTTTATCAGAGCATTTGTCAGATCTTGTGGACAAGGCGGTAGCAAGTGAAGGTGGAACTGATGATGCCAAAAGAAGGGGTGATGCTTTTGCACGTGCATTTTCAGCCCACTTAGCAAGGTTGATGGAGGAGCCTTCGGCATATGGGAAGTTAGGCCTTGCCAATCTCTTGGAAATGAGGGAAGAATGCTTGAGAGAATTCCAGTTTGTTGATGCTTACAGAAGTATAAAGCAGAGGGAAAACGAGGCATCGCTTGCTGTTTTACCTGACTTGCTGATGGAACTTGATAGTATGGATGAGGAATCAAGACTGCTTACGCTAATTGAAGGTGTTCTTGCGGCAAACATTTTTGACTGGGGATCTCGAGCATGTGTGGATCTCTATCATAAAGGAACTATTATTGAAATTTACAGAATGAGTCGCAATAAAATGCGTAGACCTTGGCGGGTGGATGATTTTGATGACTTTAAAGAGAGAATGTTAGGATCCCGAAACATGAAAAATCCACCGCACCGGAGAGCTTTACTTTTTGTAGACAACTCAGGTGCTGACATTATTCTAGGGATGCTTCCACTAGCTAGGGAGCTCCTCCGCCGTGGAACTGAAGTAGTGTTGGTTGCAAACTCACTTCCTGCTTTAAATGATGTCACTGCAATGGAGCTTCCTGACATTATAGCTGAGGCTGCCAAGCATTGTGACATTCTAAGGCGAGCTGCTGAAGTTGGAGGCTTGCTAGTGGATGCAATGATTAATACTTTAAACAGCTCTAAAGAAAATTCATCGTCAGTCCCTTTGATGGTTGTTGAGAACGGGTGTGGTAGTCCGTGTATTGACTTAAGACAGGTCAGCTCTGAGCTGGCTGCTGCCGCAAATGATGCTGATCTGTTAATTTTGGAAGGGATGGGTAGAGCTCTTCATACTAACCTCAATGCTCGGTTTAAGTGTGATGCTTTGAAGCTTGCAATGGTGAAAAATCAGAGATTGGCTGAAAAATTGGTTAAAGGGAACCTATACGACTGTATTTGCAAATACGAACCTGCTAGTTGA 2748 0.4269 MAGIVEKEQQQNQVIGIIEKEKLQKQESENNNSITRTQLESGEGEREMAPTPANSMHRSGSRPQLDVSKAEIQGNEEEKYPTILLPNQSDDLSHLALDIGGSLIKLVYFSRHEDQSVDDKRKRSVKERLGFSNGNRRSYPILGGRLHFVKFETRKINECLDFIHSKQLHCGGLESRYSDGVTDQNGIIKATGGGAYKYADLFKERLGVSLDKEDEMDCLVAGANFLLKAIRHEAFTHMEGHKEFVQIEPNDLFPYLLVNIGSGVSMIKVDGDGKFERVSGTNVGGGTYWGLGRLLTKCKSFDELLELSQKGDNRSMDMLVGDIYGGLDYSKIGLSASTIASSFGKTISEKKELEEYRPEDISLSLLRMISYNIGQIAYLNALRFRLKRIFFGGFFIRGHAYTMDTISFAVHFWSNGEAQAMFLRHEGFLGALGAFMSYEKHGLDDLMVHQLVERFPMGAPYTGGKIHGPPLGDLNEKISWMEKFLQKGTEITAPVPMTPLAGTTGLGGFEVPLSKGSTLRSDASALNVGVLHLVPTLEVFPLLADPKLYEPNTIDLSDNSELEYWLTILSEHLSDLVDKAVASEGGTDDAKRRGDAFARAFSAHLARLMEEPSAYGKLGLANLLEMREECLREFQFVDAYRSIKQRENEASLAVLPDLLMELDSMDEESRLLTLIEGVLAANIFDWGSRACVDLYHKGTIIEIYRMSRNKMRRPWRVDDFDDFKERMLGSRNMKNPPHRRALLFVDNSGADIILGMLPLARELLRRGTEVVLVANSLPALNDVTAMELPDIIAEAAKHCDILRRAAEVGGLLVDAMINTLNSSKENSSSVPLMVVENGCGSPCIDLRQVSSELAAAANDADLLILEGMGRALHTNLNARFKCDALKLAMVKNQRLAEKLVKGNLYDCICKYEPAS* 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00728 915 PIRSF PanK_long 48 915 IPR015844 GO:0004594|GO:0015937
Lapu9g00728 915 SUPERFAMILY Actin-like ATPase domain 205 438 IPR043129 -
Lapu9g00728 915 SUPERFAMILY Actin-like ATPase domain 93 233 IPR043129 -
Lapu9g00728 915 FunFam Pantothenate kinase 2 551 637 - -
Lapu9g00728 915 Gene3D Uncharacterised protein PF01937, DUF89, domain 3 716 913 - -
Lapu9g00728 915 FunFam Pantothenate kinase 2 86 246 - -
Lapu9g00728 915 FunFam Pantothenate kinase 2 233 418 - -
Lapu9g00728 915 Gene3D - 552 637 IPR035073 -
Lapu9g00728 915 PANTHER PANTOTHENATE KINASE 63 805 IPR004567 GO:0004594|GO:0005524|GO:0015937
Lapu9g00728 915 NCBIfam type II pantothenate kinase 94 437 IPR004567 GO:0004594|GO:0005524|GO:0015937
Lapu9g00728 915 MobiDBLite consensus disorder prediction 23 67 - -
Lapu9g00728 915 Gene3D - 86 246 - -
Lapu9g00728 915 Gene3D - 315 427 - -
Lapu9g00728 915 FunFam Pantothenate kinase 1 94 232 - -
Lapu9g00728 915 Pfam Fumble 94 436 IPR004567 GO:0004594|GO:0005524|GO:0015937
Lapu9g00728 915 Pfam Damage-control phosphatase ARMT1-like domain 622 900 IPR002791 -
Lapu9g00728 915 SUPERFAMILY AF1104-like 531 913 IPR036075 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00728 Lapu-Chr9 9415427 9433775 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00728 K24265 - gmx:100800121 1664.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01122 3 12111724 12124908 Lapu9g00728 9 9415427 9433775 ECH
Lapu9g00728 9 9415427 9433775 Lapu9g00728 9 9415427 9433775 ECH
Lapu3g01122 3 12111724 12124908 Lapu9g00728 9 9415427 9433775 PCT