Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00649 ATGAAGGGTGTTCTTTCCATCAGCTTCTTGTTTTGTTGCTTGCTGCTGCTTTTGGATTCTTCAATTTCACTCCCTCTATGCGTTGATTCCAGAGCACCCTTTACCCTGAACAAGACACTTGAATTTTGTCCTTACAATGGAAGCACGTGTTGCAACTCCACAGAAGATGCACAAACAGAGAAGCAATTCCAAGTGAACAACGTATCTGATCCTAGCTGTGCCTCAGTTTTGAAATCAATACTCTGTGCGAGGTGCGACCCATTTTCAGCGGAGCTATTCACTGTTCAGTCCTCAGCTAGATCAGTTCCTGTGCTTTGCAATTCCACTGTACCAGCAAATTCTTCTCAGTCAAAGACACAAGTGGAAGATTTTTGTTCTGAAGTATGGAACACATGCAAAGATGTGTCCATAATGAATTCTCCATTTGCCCCTTCATTACAAGGTCAAGCAGGAGCACCAGCTCACACCAATGCTACCAAACTCACTGATTTATGGCAGTCCAAAACAGACTTTTGCACTGCATTTGGTGGAGCATCTGATAATTCATCAGTGTGCTTTGAAGGGGAACCTGTTTCACTGAATACAACTGAGACATCTATCAGTCCCCCTCGTGGCTTGTGCCTCGAGAGAATTGGTAATGGATCTTTTCTCAACATGGTGGCTCATCCTGATGGCTCTAACCGTGCTTTCTTCTCTAACCAAATGGGCAAGGTTTGGCTGGCAACACTTCCGGAAGAGGGATCAGGAGGAACAATTGAGCTTGATGAATCAAGTCCTTTTGTTGATCTAACTGATCAAGTTTATTTTGATACTCAATTTGGAATGATGGGCATGGCATTTCATCCAGATTTTGCTAAAAATGGACGATTCTTTGCTTCATTTACATGTGATAAGTCCAAATGGTCAGGATGTAATGGAAGATGTTCTTGTAATTCAGATGTTAATTGTGACCCATCGAAGTTAGATACTGATCACGGTGCCCAACCATGCCAGTATCAAACTGTTATTGCAGAGTATTCTGCCAATAGCACTGGATCTCAGCCTTCCTCGGTGGAAAGTGCTAAGCCAACTGAGGTGAGAAGAATATTTACCATGGGGCTGCCGTTTACATCTCAACATGGAGGTCAAATACTCTTTGGACCTGATGATGGATATTTATACTTAATGATGGGATATGGAGGAGGTGCAGGTGATCCTTACAATTTTGCACAAAACAAGAAATCATTGCTTGGAAAGATTATGAGGTTTGATATAGACAACATCCCAAGTGCAGCAGAAATTAGCAAACTCGGACTTTGGGGTAACTATTCCATTCCAAATGACAATCCATTTAGCGAAGATAAAGATCTGCAGCCTGAAATATGGGCCTTAGGAATGAGGAATCCTTGGCGCTGCAGTTTTGATGCAGAAAGACCTTCCTACTTTTTGTGTGCAGATGTTGGACAGGATCTTTATGAGGAGGTGGATCTCATCACAAAGGGTGGAAACTACGGCTGGCGTGTATACGAAGGTCCCTATCTGTTCCACCCTACACAATCACCTGGAGGAAATACTTCCATAAATTCCATAAATCCAATTTTCCCAATAATGGGATACAACCATTCTGAGTTAAACAAGAATGAAGGATCAGCATCCATCACTGGAGGATATGTCTATCGATCTACCACTGATCCTTGCATGACTGGAAGATACTTGTATGGAGATCTATACGCTGGTGCAATATGGGCAGCCACAGAGAACCCAGAAAACAGTGGAAATTTCAGCAGCAGCAGAATTCCCTTCAGTTGTGCTCGTGATTCTCCTATAAAGTGCGAGTCTGCACCTGGAAACTCCCTTCCTGCTTTAGGCTACATCTTCTCATTTGGTGAAGACAACAACAAAGATGTTTATGTCCTTGCAAGCACTGGCGTCTACCGAGTTGTTCGGCCTAGTCGTTGCAGTTACGCTTGCTCGCAGGAAAAGGCCTCAACCACCACAACACCAACTCCTTCTCCTTCTCCTTCTCATGCAGCACGTTGGAGTGTCCTCTCTGAGTATCTGCTTTTGCAATGTTCATTTTTCTTGTTGATTTTATTGGGTTTTATGTAG 2088 0.432 MKGVLSISFLFCCLLLLLDSSISLPLCVDSRAPFTLNKTLEFCPYNGSTCCNSTEDAQTEKQFQVNNVSDPSCASVLKSILCARCDPFSAELFTVQSSARSVPVLCNSTVPANSSQSKTQVEDFCSEVWNTCKDVSIMNSPFAPSLQGQAGAPAHTNATKLTDLWQSKTDFCTAFGGASDNSSVCFEGEPVSLNTTETSISPPRGLCLERIGNGSFLNMVAHPDGSNRAFFSNQMGKVWLATLPEEGSGGTIELDESSPFVDLTDQVYFDTQFGMMGMAFHPDFAKNGRFFASFTCDKSKWSGCNGRCSCNSDVNCDPSKLDTDHGAQPCQYQTVIAEYSANSTGSQPSSVESAKPTEVRRIFTMGLPFTSQHGGQILFGPDDGYLYLMMGYGGGAGDPYNFAQNKKSLLGKIMRFDIDNIPSAAEISKLGLWGNYSIPNDNPFSEDKDLQPEIWALGMRNPWRCSFDAERPSYFLCADVGQDLYEEVDLITKGGNYGWRVYEGPYLFHPTQSPGGNTSINSINPIFPIMGYNHSELNKNEGSASITGGYVYRSTTDPCMTGRYLYGDLYAGAIWAATENPENSGNFSSSRIPFSCARDSPIKCESAPGNSLPALGYIFSFGEDNNKDVYVLASTGVYRVVRPSRCSYACSQEKASTTTTPTPSPSPSHAARWSVLSEYLLLQCSFFLLILLGFM* 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00649 695 PANTHER HEDGEHOG-INTERACTING PROTEIN 56 659 - -
Lapu9g00649 695 FunFam HHIP-like 1 210 635 - -
Lapu9g00649 695 Gene3D - 212 642 IPR011042 -
Lapu9g00649 695 SUPERFAMILY Soluble quinoprotein glucose dehydrogenase 205 575 IPR011041 -
Lapu9g00649 695 Pfam Glucose / Sorbosone dehydrogenase 228 509 IPR012938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00649 Lapu-Chr9 7675943 7680807 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00649 - - gmx:100778890 1276.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00649 9 7675943 7680807 Lapu9g00649 9 7675943 7680807 ECH
Lapu3g01070 3 11466166 11470735 Lapu9g00649 9 7675943 7680807 PCT