Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01070 ATGAAGGGTGTTTTTTACATCAGTTTCTTGCTGCTTTTGGATTCTTCAACTGCACTTCCTCTATGCCTCGACTCAAAGCGACCATTTACCCTCAATACCACGATCGGGTTTTGCCCTTACAATGGAAGCACGTGTTGCAATTCCACAGAAGATGAAGGGATACAGAAGCATTTCCAAGTGATGAATGTATCTGATCCTGGCTGTGCCTCGATTTTGAAATCTATACTTTGTGCGAGATGCGACCCTTTTTCAGCAGAGCTATTTACAGTTCAATCCACTCCCAGATCAGTTCCCGTGCTTTGCAATTCGACCATCCCAGCAAATTCTTCTCAGTCAAAGGCAGCAGTGCAGGACTTCTGCTCTGAATTATGGGACACATGTCAAAATGTGTCAATTATAAACTCACCATTTTCCCCTTCATTACAGGGCCAAGCAGGAGGAACATCAGGTAATAATGCCAATGCAACCAAAATAACTGAATTATGGCAATCTAAAACAGATTTTTGTAATGCATTTGGTGGAGTCTCCAGTAGTGAATCAGTTTGCTTCAAGGGGGAACCTATTGTACTAAATAACACTAAAACTCCTATGAACCCCCCTCATGGTTTGTGCCTTGAGAAAGTTGGGAATGAATCTTATCTCAATATGGTTGCTCACCCTGATGGCACTAACCGCGTATTCTTCTCTAGTCAAAAGGGTAAGGTTTGGCTGGCAACTATTCCTGATGAGGGGTCAGGAGGACAATTGGAAGTTGATGTGTTAAGTCCCTTTGTTGATCTAACCGACCAAGTTTATTTTGATACACAACTTGGAATGATGGGACTGGCATTTCATCCAAACTTTGCAAACAATGGTCGATTCTTTGCTTCATTTAACTGTGATAAAGATAAGTGGTCCGGATGTACTGGAGTATGTTCTTGTAATTCAAACGTTGATTGCGATCCATCAAAGATAGGAAATGATAATGGTGTTCAACCATGTCAGTATCAAGCTGTTATAGCAGAATATACTGCAAATGGTACTGAATCTCCGCCATCATCGACAAGTGCTAAACCAGTGGAAGTGAGAAGGATATTTACCATGGGCCTCCCTTTTATATCTCAACATGGAGGCCAAATACTCTTTGGACCTAATGATGGATATTTATACTTCATGATGGGAGATGGTGGAGGTTCAGGTGATCCATACAATTTTGCCCAAAACAAGAAATCATTGCTTGGAAAGATTATGAGGCTTGATATAAACAACATTCCAAGTGCATCAGAAATCAGCAAACTTGGCCTTTGGGGTAGCTACTCCATTCCTAAGGATAATCCATTCAATGAAGATAAAGATCTGCAACCTGAAATATGGGCCTTGGGATTAAGAAATCCATGGCGATGCAGTTTTGATTCAGAAAGACCTTCCTACTTTTTTTGTGCAGATGCTGGACAGGATCTTTATGAGGAGGTGGATCTCATCACAAAGGGTGGAAACTATGGTTGGCGTGTTTACGAGGGACCCTATCTTTTCACTCCTACAGAATCACCTGGTGGCAACACCTCCCTCAACTCCATCAATCCAATTCCCCCTATATCTGGATACAACCATTCTGAAGTAAACAAGAATGAAGGATCCGCATCTGTCACTGGTGGATATATCTATCGGTCTAGGACTGATCCTTGCATGTATGGAAGGTACCTGTACACTGATCTCTATGCTGGTGCAATATGGACAGCCTTTGAAGATCCACAAAATAGTGGAAATTATAGCACCACCAAAGTACCTTTCAGTTGTGCACATGACTCTCCTATCCAATGTGACTTAGTCCCTGGAAGCTCCCTTCCAGCTCTAGGCTTCATTTATTCATTCGGTGAAGACAACAACAAAGATGTTTATATTCTTGCAAGCACTGGTGTTTACCGTGTTGTTCGTCCCAGCCGCTGCAGTTACACTTGCTCACTGGAAAACGCAACAACCACTCCTCCTCCTTCCCCTTCTCTATCTCATGCAAGCTGCTGTAGTAACTTCTTCTCTGGATATCTGTTTCTGCATTTTTCATCATTGTCGTTGCTTTACATAGGTTTTATGTAG 2073 0.4211 MKGVFYISFLLLLDSSTALPLCLDSKRPFTLNTTIGFCPYNGSTCCNSTEDEGIQKHFQVMNVSDPGCASILKSILCARCDPFSAELFTVQSTPRSVPVLCNSTIPANSSQSKAAVQDFCSELWDTCQNVSIINSPFSPSLQGQAGGTSGNNANATKITELWQSKTDFCNAFGGVSSSESVCFKGEPIVLNNTKTPMNPPHGLCLEKVGNESYLNMVAHPDGTNRVFFSSQKGKVWLATIPDEGSGGQLEVDVLSPFVDLTDQVYFDTQLGMMGLAFHPNFANNGRFFASFNCDKDKWSGCTGVCSCNSNVDCDPSKIGNDNGVQPCQYQAVIAEYTANGTESPPSSTSAKPVEVRRIFTMGLPFISQHGGQILFGPNDGYLYFMMGDGGGSGDPYNFAQNKKSLLGKIMRLDINNIPSASEISKLGLWGSYSIPKDNPFNEDKDLQPEIWALGLRNPWRCSFDSERPSYFFCADAGQDLYEEVDLITKGGNYGWRVYEGPYLFTPTESPGGNTSLNSINPIPPISGYNHSEVNKNEGSASVTGGYIYRSRTDPCMYGRYLYTDLYAGAIWTAFEDPQNSGNYSTTKVPFSCAHDSPIQCDLVPGSSLPALGFIYSFGEDNNKDVYILASTGVYRVVRPSRCSYTCSLENATTTPPPSPSLSHASCCSNFFSGYLFLHFSSLSLLYIGFM* 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01070 690 PANTHER HEDGEHOG-INTERACTING PROTEIN 51 653 - -
Lapu3g01070 690 Gene3D - 208 608 IPR011042 -
Lapu3g01070 690 Pfam Folate receptor family 39 175 IPR018143 -
Lapu3g01070 690 SUPERFAMILY Soluble quinoprotein glucose dehydrogenase 211 571 IPR011041 -
Lapu3g01070 690 Pfam Glucose / Sorbosone dehydrogenase 216 499 IPR012938 -
Lapu3g01070 690 FunFam HHIP-like 1 207 631 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01070 Lapu-Chr3 11466166 11470735 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01070 - - gmx:100776176 1114.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01070 3 11466166 11470735 Lapu3g01070 3 11466166 11470735 ECH
Lapu3g01070 3 11466166 11470735 Lapu9g00649 9 7675943 7680807 PCT