Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00647 ATGAAGCGAAAGCTCGAAATGTTGTTTTTGTTAACGCGAAAACGATCGTTTCAGTTTCTAATCGGTGCGTTTTTCTTGTACCTCGTACTCGTCACACTCGAAATCCCTTTCGTTTTCAAAACCGACTTCACCACCGTCGCCACGCACCCTCCCAGGCTCCTTAGCGAGGAAGACTCGCAACTAAAGGAGTCCCCGGCGCGTCCTTTGACGACGGTTTCCAACGCCGACTCGCCTAGTCAACTCGCTCGCCGCAGCGTCGTTTCGGCGTTGGTCCTAAACGACGCCGCGTTCGAATCCAACGGTAACGACGGGTCGTTGGAGCTCTACAAGCTCGTAAAGCACGCGCGCCAGGTTGGACGGAGACTCTGGGAAGACCTAGAATCTGGAAAGGCGTGGACCGCAGTCTCGAAGCCCGAGAACCGATCCAGTTCGTGCCCCGGTTCGGTTTCTCTGGAAGGGTCGGAGGCCTCGGGCGTCGTGCCGCTGCCATGCGGGCTCACATTGGGGTCACACGTGACAGTCATTGGGAAGCCGTTGGCGGCGCGGCCGGACTTCGAGCCGAAGATAGCGGTTGTGACGGAGGATGAACCGGTGATGGTGTCGCAGTTCGTGGTGGAGTTGCAAGGGCTGAAGACGGTGGACGGTGAAGAGCCTCCTAGGGTTTTTCACTTCAACCCGAGGTTGAAGGGAGATTGGAGTGGGAAGCCTGTGATTGAACTCAACACGTGTTATCGCATGCAGTGGGGTTCCGCTCTCAGGTGCGACGGTTGGAAATCCAAGGCCGACGAAGATACCGTTGATAGGATGGTGAAATGCGAGAAGTGGATTAGGGATGATGAAGATCACTTAGAGGAGTCTAAGTCGTCGTGGTGGTTGAAGAGACTGATAGGGCGCACCAAGAGAGTAAATGTTGACTGGCCATTTCCGTTTTCAGAGGGGAAGCTATTTGTTCTTACTATTAGTGCTGGGTTGGAGGGGTATCATGTTACTGTTGATGGGAGACATGTGGCATCTTTTCCTTATCGCACTGGTTTTACTCTTGAGGATGCCACTGGGCTTTCGTTGACCGGAGACATTGATGTTCACTCTGTATTTGCAGCGTCTTTGCCTTCATCGCATCCCAGTTTTTCCCCACAGCGGCATCTTGAATTTTCCACCAGGTGGCGTGCCCAGCCACTTCCTGACTCTGCAGTAGAATTGTTTGTTGGTATCCTCTCAGCTGGAAATCATTTTTCTGAGCGGATGGCTGTGAGAAAGTCGTGGATGCAGCATAGGCTTGTCAAATCTGGAGCAGTGGTTGCTCGTTTCTTTGTTGCACTGCATGCAAGACAGGAAATTAATGTAGAGTTGAAGAAGGAAGCAGAATTTTTTGGTGATATTGTTATAGTGCCTTACTTAGATAACTATGATCTTGTTGTGTTGAAAACAGTGGCCATATGTGAATATGGGGTTCATACTGTTTCTGCTAAGTATATCATGAAAGGTGATGATGATACTTTTGTTAGAGTGGATGCCGTTATCAGTGAAGCTAGGAAGGTTCCAGATGATAGGAGCTTTTACATCGGTAACATAAATTACTATCATAAACCCTTGCGATACGGGAAATGGGCAGTGACATATGAAGAATGGCCAGAAGAGGATTACCCACCCTATGCTAATGGCCCGGGCTATATTTTGTCATCAGATATTGCACGATATATTGTATCTGAATTTGAAATGCATAAATTAAGGTTGTTTAAGATGGAAGATGTGAGTATGGGAATGTGGGTAGAGCAATTTAACAGCTCAAAACCTGTACACTACTCTCATAGCTTGAAGTTCTGCCAATTTGGTTGCATAGAAGACTATTACACAGCCCATTACCAATCGCCTAGGCAGATGATGTGCCTGTGGGATAAACTGCAAAGGCAGACAAGGCCTCAGTGCTGCAACATGAGATGA 1941 0.4889 MKRKLEMLFLLTRKRSFQFLIGAFFLYLVLVTLEIPFVFKTDFTTVATHPPRLLSEEDSQLKESPARPLTTVSNADSPSQLARRSVVSALVLNDAAFESNGNDGSLELYKLVKHARQVGRRLWEDLESGKAWTAVSKPENRSSSCPGSVSLEGSEASGVVPLPCGLTLGSHVTVIGKPLAARPDFEPKIAVVTEDEPVMVSQFVVELQGLKTVDGEEPPRVFHFNPRLKGDWSGKPVIELNTCYRMQWGSALRCDGWKSKADEDTVDRMVKCEKWIRDDEDHLEESKSSWWLKRLIGRTKRVNVDWPFPFSEGKLFVLTISAGLEGYHVTVDGRHVASFPYRTGFTLEDATGLSLTGDIDVHSVFAASLPSSHPSFSPQRHLEFSTRWRAQPLPDSAVELFVGILSAGNHFSERMAVRKSWMQHRLVKSGAVVARFFVALHARQEINVELKKEAEFFGDIVIVPYLDNYDLVVLKTVAICEYGVHTVSAKYIMKGDDDTFVRVDAVISEARKVPDDRSFYIGNINYYHKPLRYGKWAVTYEEWPEEDYPPYANGPGYILSSDIARYIVSEFEMHKLRLFKMEDVSMGMWVEQFNSSKPVHYSHSLKFCQFGCIEDYYTAHYQSPRQMMCLWDKLQRQTRPQCCNMR* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00647 646 FunFam Hydroxyproline O-galactosyltransferase GALT2 281 365 - -
Lapu9g00647 646 SMART galectin_3 156 367 IPR001079 GO:0030246
Lapu9g00647 646 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 379 595 IPR002659 GO:0006486|GO:0016020|GO:0016758
Lapu9g00647 646 MobiDBLite consensus disorder prediction 54 75 - -
Lapu9g00647 646 FunFam Hydroxyproline O-galactosyltransferase GALT4 157 274 - -
Lapu9g00647 646 CDD GLECT 159 365 IPR001079 GO:0030246
Lapu9g00647 646 FunFam Hydroxyproline O-galactosyltransferase 391 634 - -
Lapu9g00647 646 SUPERFAMILY Concanavalin A-like lectins/glucanases 160 365 IPR013320 -
Lapu9g00647 646 Gene3D - 155 365 - -
Lapu9g00647 646 Pfam Galactoside-binding lectin 160 365 IPR001079 GO:0030246
Lapu9g00647 646 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 158 367 IPR001079 GO:0030246
Lapu9g00647 646 Gene3D - 391 643 - -
Lapu9g00647 646 SMART Gal_bind_lectin_2 162 366 IPR001079 GO:0030246
Lapu9g00647 646 Pfam Galactosyltransferase 413 593 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00647 Lapu-Chr9 7650912 7654584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00647 4 646 Glycosyltransferase AT1G74800 63.868 0.0 884
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00647 K20843 - gmx:100816777 1172.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00647 9 7650912 7654584 Lapu9g00647 9 7650912 7654584 ECH
Lapu3g01073 3 11493799 11498010 Lapu9g00647 9 7650912 7654584 PCT