Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g01073 ATGAAAAGAGGGAGAACAGGCAAGTTAGACACTCTTCTCACATTCACCAGACAACGATCCACTCAGATTCTCCTCGTTCTGGCGCTCTTCTACGCTCTCTTCGTCACCCTCGAGATCCCCTTCGTCTTCAGAACCGCTCAAGACCCACCCTCTCGCCTCCCGCCACTCGTTCGCCGCCCAAACGGCGTCGTCTCCGGTTTGATCCTAAACGACGCCGCATTCGATTCCCACCTCTACCAATCCGCCTGCCGCCTCGGCAAGGCTCTTTGGGCCGAGCTTAAATCAGCCAACCCGCCGTCCCCTGTTTCGAAGCGCGATAACCGATCCCTGCCGTGCCCCGGATCCATCTCCATATCCGGGCCCGACTTTTTGGACCGCGGGAGTTTGATGGTGATTCCCTGTGGGCTCACGTTGGGCTCCCATGTAACGGTGGTCGGGGAGCCGTTAAGAGCGCGACGGAAGGCGTGCCAGTTCGTGATGGAGTTGCAGGGGCTGAAGACGGTGGAGGGTGAAGAACCACCTCGGGTCTTGCATTTCAATCCTAGGTTGAGAGGGGATTGGAGCGGGAAGCCTGTGATTGAACTCAACACCTGTTACCGCATGCATTGGGGTACTTCCATGCGCTGTGATGGTTGGAAATCCAGAGCTGGTGAAGATACTGTTGATGGCTTGGTGAAATGTGAGAAGTGGATTCGGGGTGATAATGACGACAGGCATGCAGTGGAGACCAAGGCACAGTGGTGGTTGAAGAGATTGATAGGTCGGACAAAACGAGTAACAGTTGACTGGCCATTTCCATTTTCTGAGAACAAGCTATTTGTTCTTACTCTCAGTGCTGGGTTGGAGGGTTACCATGTTAATGTTGATGGGAGGCATGTCACCTCTTTTCCTTATCGCACTGGTTTTACTCTTGAGGATTCCACTGGTCTTACTTTCAGCGGGGACATTAATGTCCATTCTGTATTTGCTGCCTCTTTGCCTTCGGTGCATCCCAATGATTCCCCGCAGCAGCATCTTGAATTTTCAACCAGATGGCGCGCCCCTAGTCTTCCTTACTTTGGTGTGGAATTGTTTGTTGGGATCCTTTCGGCTGGAAACCATTTTGCTGAGCGGATGGCTGTGAGGAAGTCATGGATGCAGCATAGCTTAGTCAAATCTTCGAAAGTGGTGGCTCGCTTCTTTGTAGCACTGCACCCGAGGAAGGAAATTAACGTGGAGTTGAAGAAGGAAGCAGAATATTTTGGTGATATTGTTATAGTTCCTTACATGGATAATTATGACCTTGTTGTGCTGAAAACAGTGGCCATATGTGAATACGGGGTTCGCACAGTTTCTGCGGAGTATATCATGAAGGGAGATGATGACACTTTTGTAAAAGTTGATGATGTTATGGCTCGAGCAAGGAATGTTCCATATTCTATGAGCTTTTATATTGGGAACATCAATTACCGCCACAGACCCTTGCGCCGTGGTAAATGGGCCGTGACATATGAGGAGTGGCCAGAAGAGGCATACCCACCCTATGCTAATGGACCGGGTTATATTTTGTCTTCTGATATTGCAAGCTACATTTTATCTGAATTTGAGGCGCATAAATTAAGGTTGTTTAAAATGGAAGATGTGAGCATGGGAATGTGGGTAGAACAATTTAACAGAACGAAACCCGTATACTATTTGCACAGCTTAAGGTTCTGTCAGTTTGGTTGTGTACAAGGCTATTACACAGCCCATTACCAATCCCCTAGGCAGATGATGTGCCTGTGGGATAAATTGCAGATGCAGGCAAGAACTCAATGCTGCAACATGAGATGA 1812 0.4912 MKRGRTGKLDTLLTFTRQRSTQILLVLALFYALFVTLEIPFVFRTAQDPPSRLPPLVRRPNGVVSGLILNDAAFDSHLYQSACRLGKALWAELKSANPPSPVSKRDNRSLPCPGSISISGPDFLDRGSLMVIPCGLTLGSHVTVVGEPLRARRKACQFVMELQGLKTVEGEEPPRVLHFNPRLRGDWSGKPVIELNTCYRMHWGTSMRCDGWKSRAGEDTVDGLVKCEKWIRGDNDDRHAVETKAQWWLKRLIGRTKRVTVDWPFPFSENKLFVLTLSAGLEGYHVNVDGRHVTSFPYRTGFTLEDSTGLTFSGDINVHSVFAASLPSVHPNDSPQQHLEFSTRWRAPSLPYFGVELFVGILSAGNHFAERMAVRKSWMQHSLVKSSKVVARFFVALHPRKEINVELKKEAEYFGDIVIVPYMDNYDLVVLKTVAICEYGVRTVSAEYIMKGDDDTFVKVDDVMARARNVPYSMSFYIGNINYRHRPLRRGKWAVTYEEWPEEAYPPYANGPGYILSSDIASYILSEFEAHKLRLFKMEDVSMGMWVEQFNRTKPVYYLHSLRFCQFGCVQGYYTAHYQSPRQMMCLWDKLQMQARTQCCNMR* 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g01073 603 Gene3D - 234 322 - -
Lapu3g01073 603 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 291 553 IPR002659 GO:0006486|GO:0016020|GO:0016758
Lapu3g01073 603 Pfam Galactoside-binding lectin 129 322 IPR001079 GO:0030246
Lapu3g01073 603 CDD GLECT 132 322 IPR001079 GO:0030246
Lapu3g01073 603 Pfam Galactosyltransferase 370 550 IPR002659 GO:0006486|GO:0016020|GO:0016758
Lapu3g01073 603 Gene3D - 353 592 - -
Lapu3g01073 603 Gene3D - 128 221 - -
Lapu3g01073 603 SUPERFAMILY Concanavalin A-like lectins/glucanases 130 322 IPR013320 -
Lapu3g01073 603 SMART Gal_bind_lectin_2 132 323 IPR001079 GO:0030246
Lapu3g01073 603 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 128 324 IPR001079 GO:0030246
Lapu3g01073 603 FunFam Hydroxyproline O-galactosyltransferase GALT6 128 221 - -
Lapu3g01073 603 FunFam Hydroxyproline O-galactosyltransferase GALT2 238 322 - -
Lapu3g01073 603 FunFam Hydroxyproline O-galactosyltransferase 348 591 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g01073 Lapu-Chr3 11493799 11498010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g01073 2 603 Glycosyltransferase AT1G74800 59.370 0.0 794
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g01073 K20843 - gmx:100800292 1075.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g01073 3 11493799 11498010 Lapu3g01073 3 11493799 11498010 ECH
Lapu3g01073 3 11493799 11498010 Lapu9g00647 9 7650912 7654584 PCT